Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01261 ATGCCACAGATTGAACCTTCCCGACTCGATTTCGACGTGGCAACTTCGTCTCAAATCAGGAGGCCTCATCCACCACCTCACAACAACAACGTCGCCGATTCCGTTCCAAAGGAGAACCGTCCACCACCTCACAACGGCGTTGAAGCTCCCAAGAAGTGTCGTGGTCGCCCACGGCACACCGTGAACTACGCTAACGTTGTTGGATTGAATCATAATCCTGGAATATCTTTGGATTGGACTGTTCAAGAACAACTCGCTCTTCAAAAAGGACTCGTTAAGTTTGCATCATCGTATTGTGGCACAACATTGTATGCAAAGATAGCGAAGAAGATACCAACTAAGACAATACGTGATATAGTACTTCGACTCAAATGGATGCATGAAAACGTTGTTCATATTTCAATGCAGTCCCCCGACTCGGCTGATCAACCAAACATTCTCTCAATTCATCCTCCAGAAGATGTGAGGATGGACAATGATGATGGCATCTCTTTCAAAGTTTTGAATGATACAAATATCACGAAAAACGCAACTTTTTCGTGGAAAGGTCAACCTGTGGAGCAGCCACATGAACTAGTGAAGGAAACTAAAAGCTTTAGCTATAACTCATTGAGATCTGCTACAGGAGATTTTCATCCTTCATGCAAAATTGGTGGTGGAGGCTATGGAGTTGTCTACAAGGGAGTTTTGAAGGATGGTACTGAAGTTGCTATCAAGTCACTTTCTGTAGAGTCTAAACAAGGAATACATGAATTTATGACAGAAATTGATATGATATCAAATATAAGACATCCAAATCTTGTGAAACTAATTGGCTTCTGTGTCGAGGGTAATCATCTAATATTGGTGTACGAGTTTCTGGAGAACAATAGCCTTGCAAGTTCTTTGCTAGGTTCAAAAAGTAAATGTGTTCCTCTGGATTGGCCAAAGAGGGCTACTATTTGCCGCGGTACAGCTTCTGGTCTAAGCTTTCTTCATGAAGAAGCACAGCCAAACATTGTTCACAGAGATATCAAAGCTAGCAACATATTGTTGGATGAGAATTTCAATCCAAAAATTGGAGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACACATGTTAGTACCCGAGTTGCTGGAACAATGGGATATCTTGCGCCCGAATATGCGCTTCTAAGTCAGCTTACAAAGAAGGCTGATGTATACAGTTTTGGAATTCTTATGCTTGAAATTATCAGTGGTAAAAGTAGTAGCAAAGCTGCATTTGGTGACAACATTTTGGTTCTGGTGGAATGGGCATGGAAGCTGAAAGAAGAAAATAGGCTTCTAGAACTTGTCGATTCAGAACTAATCGATTACGATGAAATCGAGGTGTATCGGTTCCTTGTGGTTGCTCTATTTTGTACTCAATCAGCAGCTCAACATAGACCAACTATGAAACAAGTACTAGAAATGCTTTCCAAACAAGTTCATCTTAATGAGAAGGCATTGACTGAGCCTGGAATATACAGATGGAATACCTCCGGAAAAAGGAGAGGTTCATCGAATGAAACATCGTCGTCATCTCAAATAATTAAGTACAAAAAATCTGAAAATCGATATCAAACCTCGACGCAATTTAGCAGTACTGATATTGTGACAGAAATGTTTCCTAGATGA 1644 0.4069 MPQIEPSRLDFDVATSSQIRRPHPPPHNNNVADSVPKENRPPPHNGVEAPKKCRGRPRHTVNYANVVGLNHNPGISLDWTVQEQLALQKGLVKFASSYCGTTLYAKIAKKIPTKTIRDIVLRLKWMHENVVHISMQSPDSADQPNILSIHPPEDVRMDNDDGISFKVLNDTNITKNATFSWKGQPVEQPHELVKETKSFSYNSLRSATGDFHPSCKIGGGGYGVVYKGVLKDGTEVAIKSLSVESKQGIHEFMTEIDMISNIRHPNLVKLIGFCVEGNHLILVYEFLENNSLASSLLGSKSKCVPLDWPKRATICRGTASGLSFLHEEAQPNIVHRDIKASNILLDENFNPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLSQLTKKADVYSFGILMLEIISGKSSSKAAFGDNILVLVEWAWKLKEENRLLELVDSELIDYDEIEVYRFLVVALFCTQSAAQHRPTMKQVLEMLSKQVHLNEKALTEPGIYRWNTSGKRRGSSNETSSSSQIIKYKKSENRYQTSTQFSSTDIVTEMFPR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01261 547 Pfam Protein kinase domain 214 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01261 547 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 194 538 - -
Car03g01261 547 Gene3D Phosphorylase Kinase; domain 1 172 286 - -
Car03g01261 547 MobiDBLite consensus disorder prediction 1 55 - -
Car03g01261 547 Gene3D Transferase(Phosphotransferase) domain 1 287 495 - -
Car03g01261 547 ProSiteProfiles Protein kinase domain profile. 211 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01261 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Car03g01261 547 SUPERFAMILY Protein kinase-like (PK-like) 189 481 IPR011009 -
Car03g01261 547 SMART serkin_6 211 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01261 547 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
Car03g01261 547 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 194 538 - -
Car03g01261 547 CDD STKc_IRAK 230 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01261 Car-Chr3 57051296 57058256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01261 198 496 Receptor kinase-like Gene Family AT1G56120 53.177 8.07e-100 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car03g01261 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01261 - - gmx:100816683 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01261 03 57051296 57058256 Car03g01261 03 57051296 57058256 ECH