Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01253 ATGTCTTTGATGTCACCACTAGAAATCAACATAGTACATCGTATTAAAACTCACCGATTTCATGATTTGACTCTTGGCAGAGGACATGCCAAGTATGTTGACAACTACCCTGAGTACAGAAAAATGCATGGGAATGTGACAAAGCATATAACTTTGGAAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCCATGGAGGGGTTGCTGATAAACAAGCTGGAAAATACAGTGGTGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTAATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCTTCAAGAAAATGTTTATGGAATGTTATCAAGCTTGCAAAACAGGATCGTGCAATCATTCTGACAACACATTCTATGGAAGAGGTGGAGGCCTTATGCGATCGATTAGGAGTATTTGTAAATGGTAACTTGCAGTGCATCGGAAATCCAAATGAGGTACTTGCTCAAGTGATATGCTTTAATCAAAGTGTATTTCAAAATGAAACTATTAAATGGGTTTGCCCATAA 552 0.3841 MSLMSPLEINIVHRIKTHRFHDLTLGRGHAKYVDNYPEYRKMHGNVTKHITLEVEESLKSLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEVEALCDRLGVFVNGNLQCIGNPNEVLAQVICFNQSVFQNETIKWVCP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01253 183 ProSitePatterns ABC transporters family signature. 76 90 IPR017871 GO:0005524
Car03g01253 183 PANTHER ABC TRANSPORTER A FAMILY MEMBER 7-RELATED 48 163 - -
Car03g01253 183 Pfam AAA domain, putative AbiEii toxin, Type IV TA system 74 136 IPR003959 GO:0005524|GO:0016887
Car03g01253 183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 164 IPR027417 -
Car03g01253 183 Gene3D - 15 178 IPR027417 -
Car03g01253 183 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 48 163 IPR026082 GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01253 Car-Chr3 56852709 56854113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01253 70 164 Calmodulin-binding Proteins AT2G36910 24.242 1.30e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01253 - - cam:101490887 329.717