Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01236 ATGACGTTTTCTATGGACTTGAATGCCTCTCCTGTGCCGGAAGATGATGAAGATGCTTTTGAAGGCCAGGTAGAAGAGTATAATGCACCAAAAGAGGAGTATAGTGCGCCAAAAGAGGAGTATAATGCGCCAAAGGAGGAGTATAACGCGCCAGAAGAGCATATAGAAAGTGCAGTTGACATAGCACGCCGGGAACGTGAAGAAAGAAAGAGACGGTTGAAAAGAGAACGTTCAGATGACAGGCCCATGCAAGTATCACAGCCACCTGGATGTGATCATTTTTTCCACAATAAGATCCTTAAATCATATGATAGAAGTAAGCTTCCTCCGGGTTGGTTGGATTGCCCTTCGTCTGGCCAAGAAATTTTTGGCATGATACCTTCCAAGGTTCCACTGGGTGAATCCTTCAATGACTACATTTTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTCATTGATTTAACAAATACTTCTCGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATCCAATGCAAGGGCCGCGGTTCAGTACCTGATAATTCATCTGTTAATCATTTTGTCTATGAGGTTTTACAATTTTTATCACGTCAAAAACACTCGAAGAAGTATATACTTGTTCATTGTACACATGGTCATAATCGTACTGGATATATGATCATCCATTATCTGATGCGCACAATGTCAATGTCTGTTACTCAGGCGATAAAAATATTTTCTGATGCACGTCCTCCAGGAATCTATAAACCTGAGTATATTGATTCATTATATAAATTTTATCATGAAAAGAAGCCTGAAATGATAGTTTGTCCTCCTACTCCGGAGTGGAAGAGGACTCCCGAACTTGTTGATCTCAATGGTGAAGCAGCTCCAgataatgatgatgatgatgatgatgatgGAGTACCAGGTCCTCCTTTGCAGGAGAACCACGAGATTGAGACAATAATGACAAATGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAAGATGCATTTCGGAAGTTCTGCTTTCAAATACTCAAATTGGGGGTTGGGGCCAGAGGACACATGCAATTTCCGGGATCGCACCCAGTTTCTTTAAACAGGGATAATTTACAGCTGTTACGACAGCGTTACTACTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGGTGCTACTTGATTGATAGAAACTTCAATTTTCGAAGGGTTCAAATGAGGTTTCCTTGCAGGTTTACAAATGATGGCTTGGCTGAGAAGACTCACCACTTTACATTACTGGATGGGGAGATGATTATTGATACATTGCCAGATTCAAAGAAGCAGGAAAGGAGATACCTAATATATGATCTGATGGCAGTCAACTTCATTTCGGTGATAGAGCGACCTTTCTGTGAACGGTGGAAGATGCTTGAGAAGGAAGTGATTGAACCCAGAAATCAGGAACGGTACCAAGGCAAAAATCCATACTATAGATATGACATGGAGCCTTTCAGGGTGAGGAGGAAAGCTTTTTGGTTGCTCTCTACTGTCACAAAACTTTTGAACGAATTCATTCCGAAACTCTCACATGATGCAGATGGTCTCATATTTCAGGGATGGGACGACCCTTATGTACCACGCACTCACGAAGGCCTCTTAAAGTGGAAATATGCTGATCTGAATTCAGTTGATTTTCTCTTTGAGATTGATGGTGATCGTCAGCTGCTTTTTCTCCATGAACGTGGAAAAAAGAAACTCATGGAAGGGTATATTGTTGCATTTGAAGAAGGTTCAGACCCCTCTCTTTATTCCGGAAAGATCATTGAGTGTGCTTGGGATGGTGATAGACATGAATGGATATTCAAGCGAATCAGAACAGATAAGTCAAATCCCAATGACTTTAATACTTACAAAAAGGTCCTTCGCCAACTCCTTTGA 1992 0.4021 MTFSMDLNASPVPEDDEDAFEGQVEEYNAPKEEYSAPKEEYNAPKEEYNAPEEHIESAVDIARREREERKRRLKRERSDDRPMQVSQPPGCDHFFHNKILKSYDRSKLPPGWLDCPSSGQEIFGMIPSKVPLGESFNDYIFPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNSSVNHFVYEVLQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRTMSMSVTQAIKIFSDARPPGIYKPEYIDSLYKFYHEKKPEMIVCPPTPEWKRTPELVDLNGEAAPDNDDDDDDDGVPGPPLQENHEIETIMTNDDVLGDEIPNDQQDAFRKFCFQILKLGVGARGHMQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRFPCRFTNDGLAEKTHHFTLLDGEMIIDTLPDSKKQERRYLIYDLMAVNFISVIERPFCERWKMLEKEVIEPRNQERYQGKNPYYRYDMEPFRVRRKAFWLLSTVTKLLNEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYADLNSVDFLFEIDGDRQLLFLHERGKKKLMEGYIVAFEEGSDPSLYSGKIIECAWDGDRHEWIFKRIRTDKSNPNDFNTYKKVLRQLL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01236 663 MobiDBLite consensus disorder prediction 24 82 - -
Car03g01236 663 PIRSF mRNA_capping_HCE 94 663 IPR017074 GO:0004484|GO:0006370|GO:0140818
Car03g01236 663 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 661 - -
Car03g01236 663 SUPERFAMILY Nucleic acid-binding proteins 577 660 IPR012340 -
Car03g01236 663 Pfam mRNA capping enzyme, catalytic domain 379 574 IPR001339 GO:0004484|GO:0005524|GO:0006370
Car03g01236 663 Pfam Dual specificity phosphatase, catalytic domain 160 280 IPR000340 GO:0008138|GO:0016311
Car03g01236 663 Gene3D DNA ligase/mRNA capping enzyme 338 574 - -
Car03g01236 663 Pfam mRNA capping enzyme, C-terminal domain 579 660 IPR013846 -
Car03g01236 663 MobiDBLite consensus disorder prediction 308 323 - -
Car03g01236 663 SMART dsp_5 142 282 IPR020422 GO:0006470|GO:0008138
Car03g01236 663 Coils Coil 59 79 - -
Car03g01236 663 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 107 297 IPR029021 -
Car03g01236 663 MobiDBLite consensus disorder prediction 1 89 - -
Car03g01236 663 CDD RNA_5'-triphosphatase 111 278 - -
Car03g01236 663 PANTHER MRNA-CAPPING ENZYME 3 661 - -
Car03g01236 663 Gene3D - 575 663 IPR012340 -
Car03g01236 663 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 339 575 - -
Car03g01236 663 CDD Adenylation_mRNA_capping 350 575 IPR001339 GO:0004484|GO:0005524|GO:0006370
Car03g01236 663 ProSitePatterns Tyrosine specific protein phosphatases active site. 227 237 IPR016130 GO:0016311|GO:0016791
Car03g01236 663 Gene3D Protein tyrosine phosphatase superfamily 89 301 IPR029021 -
Car03g01236 663 ProSiteProfiles Dual specificity protein phosphatase domain profile. 130 286 IPR020422 GO:0006470|GO:0008138
Car03g01236 663 MobiDBLite consensus disorder prediction 305 329 - -
Car03g01236 663 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 205 274 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01236 Car-Chr3 56513396 56526269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01236 1 662 Protein tyrosine phosphatase (PTP) family AT3G09100 64.768 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01236 K13917 - gmx:100803597 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01236 03 56513396 56526269 Car03g01236 03 56513396 56526269 ECH