Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01200 ATGGCTACTAATCAAGAAGATGTCAAGCTTTTGGGAACTGTGGGAAGCCCATTTGTGTGCAGGGTACAAATTGCTCTCAAATTCAAGGAAATTCAATACAAATTTCTTGAACAAAATTTGTTCGACAAAAGTGAATTACTCCTCAAATATAATCCAGTTTATAAAAAAGTTCCAGTTTTTGTTCACAATGAACAGCCTATTTCAGAGTCCCTTGTGATTCTTGAGTACATTGATGAGGTTTGGAATCAAAACCCCATTTTGCCCTCTGATCCTTATCAAAGAGCATTGGCTCGTTTCTGGGCTAAGTTCATTGACGACAAGATTGTGAGTTCTTCATTTAAAGCTGTTTTTACGGTTGATGATGAGAAAGAGCGTGAAAAGAATGTTGAAGAATCAAGTGAGGCTCTAAAGATTCTTGAGAATGAGTTGAAGGACAAGTTCTTTGGAGGAGAAGAGTTTGGATTTGTTGATATTGCTGCTGTGTTCATAGCATTTTGGATCCCTTTGGTTCAAGACATAACAGGGTTGCAATTGTTCACTGCTGAGAAGTATCCAAAACTTCACAATTGGAGCCAAGAATTTCTCAACCATCCAGTTGTGAAGGAAAATTTGCCTCCTAGAGAACCTCTTTTTGCATTTTTCAAAGGAGAGAAGACAATTGTCAGTGCCAAAGCAGAAGTTGTAATGTTGAAAAGGATGGAACTTGGAGACTTGGAGTATCCTTTTACTCCAAGTGCAATACTTTCAAATATTGAAGGTGTAACAAGCTGGCACCAAGCAAAAGATAACAAGAACATGCTCAGTTGGTTTCCTCCACCATCAAATACTTGGAAATCGAATGTGGATGGTTCGTCGAAAAGTACATTGGGCCCAAAGGATATAAGTGGTGTTCTTCAAAATGAATGCTATGAGGTTTTGTTGTGTTTCTGCTGGTATGTGTGA 942 0.3832 MATNQEDVKLLGTVGSPFVCRVQIALKFKEIQYKFLEQNLFDKSELLLKYNPVYKKVPVFVHNEQPISESLVILEYIDEVWNQNPILPSDPYQRALARFWAKFIDDKIVSSSFKAVFTVDDEKEREKNVEESSEALKILENELKDKFFGGEEFGFVDIAAVFIAFWIPLVQDITGLQLFTAEKYPKLHNWSQEFLNHPVVKENLPPREPLFAFFKGEKTIVSAKAEVVMLKRMELGDLEYPFTPSAILSNIEGVTSWHQAKDNKNMLSWFPPPSNTWKSNVDGSSKSTLGPKDISGVLQNECYEVLLCFCWYV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01200 313 CDD GST_N_Tau 8 81 - -
Car03g01200 313 Gene3D - 90 224 - -
Car03g01200 313 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Car03g01200 313 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Car03g01200 313 Pfam Glutathione S-transferase, C-terminal domain 119 198 IPR004046 -
Car03g01200 313 SFLD Main (cytGST) 4 224 - -
Car03g01200 313 Coils Coil 122 142 - -
Car03g01200 313 Gene3D Glutaredoxin 1 89 - -
Car03g01200 313 SFLD Main.3: Omega- and Tau-like 4 224 IPR045073 -
Car03g01200 313 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Car03g01200 313 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Car03g01200 313 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Car03g01200 313 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Car03g01200 313 SUPERFAMILY GST C-terminal domain-like 79 215 IPR036282 -
Car03g01200 313 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01200 Car-Chr3 55703578 55706074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01200 4 216 Glutathione S-transferase Gene Family AT3G09270 51.389 1.60e-73 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01200 K00799 - gmx:100806714 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01200 03 55703578 55706074 Car03g01200 03 55703578 55706074 ECH