Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01187 ATGTGGTTGATGCAGCCTCAATTTTGTTACTCTATTGATACTGACAAGATAATGTTAGCAAAACAAACCGGTCTATCTCGTAACCAGGTGTCTAATTGGTTTATAAATGCAAGAGTGAGACTATGGAAACCAATGGTAGAAGAGATACACATGCTTGAATCACAACAAACTCAAAAGGAACCACAAAGAGATGAGAATCCATCTACCTCAACAGACAAATTTCAGTTACGTTCAAATAACAACATTGCAGAGAATCCATGTAACTCCACAGACAAATTTCATAATGTCGCATATAAACGGACTAGAAACGAACTTTCAAATATGTCGGTGTTGAATCAACAAGTTGGTAGTAATGGAGTGAGCAAGGGGAGTAACGTTGCAACGAGCAATAATGGTGTCTCTCTGACACTCAGTCTTCATAAGAATCATGGTATTGGGTTATCGGAGCCGTTTAACATGAGTGTCGCCCAACGTTTTGGCCTTGCACTTCAACCTGATAGCTACGTCACGAGTACTTTTCAATCACAAAATAGACAATTTGGTAGAGACCATATTGGAGGGCAACTTTTGCATGACTTTGTAGGGTGA 588 0.3946 MWLMQPQFCYSIDTDKIMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQTQKEPQRDENPSTSTDKFQLRSNNNIAENPCNSTDKFHNVAYKRTRNELSNMSVLNQQVGSNGVSKGSNVATSNNGVSLTLSLHKNHGIGLSEPFNMSVAQRFGLALQPDSYVTSTFQSQNRQFGRDHIGGQLLHDFVG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01187 195 Pfam Homeobox KN domain 14 40 IPR008422 GO:0003677|GO:0006355
Car03g01187 195 CDD homeodomain 15 45 IPR001356 GO:0003677
Car03g01187 195 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 173 - -
Car03g01187 195 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 9 173 - -
Car03g01187 195 Gene3D - 2 49 - -
Car03g01187 195 MobiDBLite consensus disorder prediction 53 74 - -
Car03g01187 195 SUPERFAMILY Homeodomain-like 15 51 IPR009057 -
Car03g01187 195 ProSiteProfiles 'Homeobox' domain profile. 15 44 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01187 Car-Chr3 55266984 55267869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01187 10 195 Homeobox Transcription Factor Family AT5G02030 46.698 1.52e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Car03g01187 Homeobox_KN 1.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01187 - - cam:101491019 377.481