Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01159 ATGGTTCCACTATACATCATTTTTTGTTCTTTGATGGACCACCAACATAAGTTTATGTTAATATTCACAGCAACAGCAGCAATGTTGCTATCATGCGCTGTGACGCTACAACACTGCGGTAATTGTGGTTCAAACCCGGTTCCATATCCATTAAGCACTGGACCCAACTGCGGTGACCCGCATTACAAAATCCGGTGCACCGCAGGCACGCTGTGGTTAGATGCACTTGCGGGGTCATCCTATATGATTGTATCCATTGACCAGAAAATCCGTCGGATTATAACCCGACCCGCTACATTTGAACGAAACAAGTGCGTGTCCACGGACTTACGCAGCGAAGGCATGCACCTGAACGAGACTCTTCCTTTCAGTTTAGCCGCGGGAAACACCGTTTTTTTATTCAACTGCACCGTTAAAGTACAACACGCGCCGCCGATGGATTGTACAGTAAGGAGTCTGTGCCATAGCTACATCAAGGACCATATAGATAATGCAAGCGCGTGTGGGCGCGTGGGTATGTGCTGCTCGTATGTTACTGGCAGTGGCCGTAAAGATTATGTAGTTCGGGTTTATGGTGGAGGATGCGCGGCGTATATGAGTTTTTTGGATTTGAATGGTGCGGTGGGGACAGTGGGAAAGCGGTGGCCAGAACCTGGAGTTGGGATAGAGTGGGTGGCGCCTCAGGAACCGGTTTGTAAGGTGCCGATGGATTGCAATGAATTGTTGAATTCGAAGTGTGGAATGGGGGTTGGTGGGGTGCAGAGGTGCTTCTGCAATGTTGGCTTCAAATGGGATTCAATTAATGGATCGTGtcaatctcaaactcaatatcagaatcagacccaagctcaagctcaaaATGCAAAATGTGTGGGGCATGGGAAAGTTAGCCGCTGCAAAGTTAAGAAGAAAAAGAAAATGCTTCTAGCTGTCATAGTTTCCTTAGGAGGAATAGTAACAATTGCAACATTAATTGGATTCATTCTCTACAAGAAGAAGAATCAAATGGAAACAAAAGCAGAGAATGCCAAAATCAAAAAAAGCAAAGACATCTCAAGTGCCAAAGCTAGTGCTCTATCATCAAGAATCTTCACAGGCAGAGAGATTCAGAAAGCAACCAACAATTTCTCCCAAGAAAATCTCATAGGCTCTGGTGGTTTTGGTGAAGTCTTCAAAGGAACTTTTGATGATGGAACCATCACAGCCATAAAACGTGCTAAACTTGGTAACACAAAAAGCATTGATCAAATGCAAAATGAGATTAGAATTCTCTGCCAAGTTAACCATAGAAGCCTTGTTAGACTCATTGGCTTTTGCTTAGAACTTGAACACCCTCTACTAATTTATGACTATGTTTCAAATGGGTCACTTTTTGATTACCTTCATAACAAAAGGGCACCTCTCAAATGGATTCAAAGGCTCAAAATTGCACACCAAACAGCTGAAGGGTTATCCTATCTACATTCTTCGGCCGTGCCTCCGATTTACCATCGTGATGTGAAATCGAGCAACATACTTCTTGATGAGAAGTTTAATGCAAAAGTTTCTGACTTTGGATTATCTAGGCTAGTGGAAATAGCTGAACAAAATAAAAGTCATATTTTTACTAGTGCACAAGGAACACTTGGTTATCTTGATCCGGAGTATTATCGCAATTTTCAGTTAACCGATAAGAGCGATGTTTATAGCTTTGGAGTGGTGTTGATGGAGTTGTTAACTTCTGAGAAAGCTATTGATTTTAATAGGGAAGAAGAGAATGTGAATTTGGCTATTTATGGTAAGAAGAAATTGATTGAAGAGAGGTTGATGGATGTTGTTGATCCTGTGATGAAAGATGGAGCTAGTGATTTGGAATTGGAAACTATGAAATGTTTGGGGTATTTGGCTACTTCTTGTTTGGAGGAACAGAGGCAAAAAAGGCCTACAATGAAAGAAGTTTCAGATGAGATTGAATACCTTGTTAAAATTGTTAAAGGTGAGGCTTCCAAATCATGA 1995 0.41 MVPLYIIFCSLMDHQHKFMLIFTATAAMLLSCAVTLQHCGNCGSNPVPYPLSTGPNCGDPHYKIRCTAGTLWLDALAGSSYMIVSIDQKIRRIITRPATFERNKCVSTDLRSEGMHLNETLPFSLAAGNTVFLFNCTVKVQHAPPMDCTVRSLCHSYIKDHIDNASACGRVGMCCSYVTGSGRKDYVVRVYGGGCAAYMSFLDLNGAVGTVGKRWPEPGVGIEWVAPQEPVCKVPMDCNELLNSKCGMGVGGVQRCFCNVGFKWDSINGSCQSQTQYQNQTQAQAQNAKCVGHGKVSRCKVKKKKKMLLAVIVSLGGIVTIATLIGFILYKKKNQMETKAENAKIKKSKDISSAKASALSSRIFTGREIQKATNNFSQENLIGSGGFGEVFKGTFDDGTITAIKRAKLGNTKSIDQMQNEIRILCQVNHRSLVRLIGFCLELEHPLLIYDYVSNGSLFDYLHNKRAPLKWIQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDEKFNAKVSDFGLSRLVEIAEQNKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTSEKAIDFNREEENVNLAIYGKKKLIEERLMDVVDPVMKDGASDLELETMKCLGYLATSCLEEQRQKRPTMKEVSDEIEYLVKIVKGEASKS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01159 664 Gene3D Phosphorylase Kinase; domain 1 333 451 - -
Car03g01159 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Car03g01159 664 ProSitePatterns Protein kinases ATP-binding region signature. 382 404 IPR017441 GO:0005524
Car03g01159 664 CDD STKc_IRAK 382 651 - -
Car03g01159 664 Pfam Protein kinase domain 377 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01159 664 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 659 IPR045274 GO:0007166
Car03g01159 664 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 30 659 - -
Car03g01159 664 Gene3D Transferase(Phosphotransferase) domain 1 452 662 - -
Car03g01159 664 ProSiteProfiles Protein kinase domain profile. 376 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01159 664 SUPERFAMILY Protein kinase-like (PK-like) 350 648 IPR011009 -
Car03g01159 664 SMART serkin_6 376 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01159 Car-Chr3 54268045 54271634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01159 39 664 Receptor kinase-like Gene Family AT5G02070 53.365 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car03g01159 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01159 - - aprc:113862410 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01159 03 54268045 54271634 Car03g01159 03 54268045 54271634 ECH