Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01154 ATGTCTTATAGCTACTTCCCCATTAGTTGCCAAAGAAAGATGGAGTACAACACCCAAAACTCTAATAAATCTGAGCAAATAAGATGGAGCTCAGATGATATAGGTGGTCCTGGTCAAGTTAGATCTTATTCTTGTACTTTTTGCAAGAGAGGATTCTCTAATGCACAAGCATTAGGAGGACACATGAATATTCATAGAAGGGATAGAGCTAAACTCAAACAATCTTCTGAAGAAAATTTGATTTCCTTAGACATCTCAACAAAAAACACAAATGAGCATGTTGATTTGGAATATAATCATGAAAATCAAAGGGGAAAGTTAATTAACATAACAAAAGAACTTCCTTTTGTGGACATAAAAGGAAGTGGTGTTATGGCTCATAGGATTGAAGACAAAAAAGGTGATTTAGACCTTGAGCTTAGGTTAGGTTTTGAGCCAATGGATTCATCAACATTGAGCACTCGATCATTCTTTTGA 477 0.3522 MSYSYFPISCQRKMEYNTQNSNKSEQIRWSSDDIGGPGQVRSYSCTFCKRGFSNAQALGGHMNIHRRDRAKLKQSSEENLISLDISTKNTNEHVDLEYNHENQRGKLINITKELPFVDIKGSGVMAHRIEDKKGDLDLELRLGFEPMDSSTLSTRSFF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01154 158 Gene3D Classic Zinc Finger 35 105 - -
Car03g01154 158 SUPERFAMILY beta-beta-alpha zinc fingers 41 69 IPR036236 -
Car03g01154 158 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
Car03g01154 158 PANTHER OS07G0101800 PROTEIN 14 154 - -
Car03g01154 158 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 14 154 - -
Car03g01154 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 70 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01154 Car-Chr3 54037356 54038898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01154 39 143 C2H2 Transcription Factor Family AT3G09290 40.146 1.73e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car03g01154 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01154 - - lja:Lj1g3v3443990.1 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01154 03 54037356 54038898 Car03g01154 03 54037356 54038898 ECH