Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01149 ATGCTCCTTCCAACCTCACACTACATCCCTTTCAATTTCATCATGCAAACCCTTCTTCAATTCTTCATACCATTTTTTCTCTTCCATTTTGTCCCAATTTCATCCCAAGTTGACCAACTCATATACACAGGATTTAAGGATGTTGGTCCTAACAATATAACCTTAAATGGAATTGCAGAGATTGAAAAAAATGGAGTATTAAGGTTGACAAATGAAACAAGTAGGTTAATGGGTCATGCTTTTTACCCTTTACCTTTTCAACTAAAGAACAAAACAACTGGTAAAGTTTTCTCCTTTTCTTCATCTTTTGCTATTGCTGTTGTTCCTGAGTATCCTAAACTAGGTGGTCATGGAATGGCTTTCACATTGGCACCTTCTAAGAATCTCAATGCTTTGCCAAGTCAGTATCTTGGTCTTCTTAATTCTAGTGATGCTGGTAATTTCACTAACCATCTTTTTGCTGTTGAGTTTGATACTGTTCAAGATTTTGAGTTTGGTGATATTAATGATAACCATGTTGGAATTGACATTAATAGTTTGGTGTCAAATGCTTCTGTTGCTGCGGAATATTACACTGATGATTCAACTAAACAAAATCTTAATATTAAAGGTGGAAAACCAATTCTAGTTTGGGTTGAATATGACTCTTTGGTTAATGTTGTTAGTGTTACACTTTCTCCAACTTCAAACAAACCCAAAAAACCAATTTTGTCTGTTCATATGGATTTGTCACCTATTCTTCTTGATACTATGTATGTTGGTTTCTCTGCTTCAACTGGTTTACTTGCTAGCTCTCACTATTTATTGGGTTGGAGCTTTAAAATCAATGGTCCTGCACCATTTCTTGATTTGTCTTCATTACCACAACTTCGACAACCAAAGAAGAAAAACACTTCTTTGATAACTGGTGTTTCGGTAACCGCTTTGGTAATTGCATTGTGTTCTATAGGAATTGGTTTTTACCTTTATAGGAAAATCAAGAATGCTGATGTGATAGAAGCATGGGAGCTTGAAGTTGGTCCACATAGGTATTCCTATCAAGAGCTCAAGAAAGCAACAAAAGGTTTCAAGGAGAAAGGGTTACTTGGGCAGGGCGGTTTTGGAAGAGTTTACAAAGGGACATTGCCGAATTCAAGGGTACAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGTTGAGAGAATTTGTGTCGGAAATCGCTAGCATAGGCCGGCTTCGACATCGGAATTTGGTTCAGTTACTTGGGTGGTGTCGCCGCAAAGGCGACCTACTACTCGTGTACGATTTCATGGCTAATGGAAGCTTAGAAAAGTACTTGTTTGATAAGACAGAATTTGTGCTGAGTTGGGAACAAAGGTTTAAGATTATAAAGGGTGTCGCTTCGGGTCTTTTATATCTACATGAAGGTTATGAGCAAGTTGTGATACATAGAGATGTTAAAGCTAGCAATGTGCTTTTAGATTTTGAACTCAATGGAAGATTAGGTGATTTTGGTTTGGCTAGGTTGTATGAACATGGTGCTAATCCAGGAACAACAAGAGTTGTTGGAACCTTAGGCTATTTGGCGCCTGAGTTACCTAGAACTGGAAGAGCAACAACGGGTTCCGATGTTTTTGCATTTGGGGCACTTCTTCTTGAAGTTGCTTGTGGAAGAAGGCCTATTGAACCTAAAGCATTACAAGAAGAGTTAGTTTTGGTGGATTGGGTTTGGGAAAGGTTCAAAGAAGGAAGAGCACTTGAAGTAGTTGATCCTAAATTAAATGGTGATTTTGATGAAAGTGAGGTGATTATGGTGTTGAAATTAGGATTGATATGTTCAAATGATGTTCCTACTATAAGGCCTAGTATGAGACAAGTTGTGAGGATTTTGGATGGAGAAGTTGAGTTGCCAAATGATTTGAGAAAGCCAGGAAGTATGGAACGACAAGAAGGGTTTGATGAATTCTTGCATTCACTTGCATCTTCTTCATTTGATAAGATGAGTTCAAGTTCTTATATTGGAAATAGAGATATTGATACTAGTTTGTTCTCTTTTGCTAATTCACCTCAATCACTTCTCAATGTTAGAGGTGAAACAAGGTGA 2091 0.3754 MLLPTSHYIPFNFIMQTLLQFFIPFFLFHFVPISSQVDQLIYTGFKDVGPNNITLNGIAEIEKNGVLRLTNETSRLMGHAFYPLPFQLKNKTTGKVFSFSSSFAIAVVPEYPKLGGHGMAFTLAPSKNLNALPSQYLGLLNSSDAGNFTNHLFAVEFDTVQDFEFGDINDNHVGIDINSLVSNASVAAEYYTDDSTKQNLNIKGGKPILVWVEYDSLVNVVSVTLSPTSNKPKKPILSVHMDLSPILLDTMYVGFSASTGLLASSHYLLGWSFKINGPAPFLDLSSLPQLRQPKKKNTSLITGVSVTALVIALCSIGIGFYLYRKIKNADVIEAWELEVGPHRYSYQELKKATKGFKEKGLLGQGGFGRVYKGTLPNSRVQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRKGDLLLVYDFMANGSLEKYLFDKTEFVLSWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGRATTGSDVFAFGALLLEVACGRRPIEPKALQEELVLVDWVWERFKEGRALEVVDPKLNGDFDESEVIMVLKLGLICSNDVPTIRPSMRQVVRILDGEVELPNDLRKPGSMERQEGFDEFLHSLASSSFDKMSSSSYIGNRDIDTSLFSFANSPQSLLNVRGETR 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01149 696 Gene3D - 39 277 - -
Car03g01149 696 SUPERFAMILY Protein kinase-like (PK-like) 338 630 IPR011009 -
Car03g01149 696 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01149 696 ProSiteProfiles Protein kinase domain profile. 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01149 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 294 IPR013320 -
Car03g01149 696 Pfam Protein kinase domain 356 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01149 696 CDD lectin_legume_LecRK_Arcelin_ConA 39 277 IPR001220 GO:0030246
Car03g01149 696 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 19 682 - -
Car03g01149 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Car03g01149 696 CDD STKc_IRAK 362 628 - -
Car03g01149 696 PANTHER - 19 682 - -
Car03g01149 696 Pfam Legume lectin domain 39 287 IPR001220 GO:0030246
Car03g01149 696 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Car03g01149 696 Gene3D Transferase(Phosphotransferase) domain 1 433 641 - -
Car03g01149 696 Gene3D Phosphorylase Kinase; domain 1 341 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01149 Car-Chr3 53966471 53968843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01149 33 687 Receptor kinase-like Gene Family AT3G55550 58.045 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car03g01149 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01149 - - gmx:100784346 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01149 03 53966471 53968843 Car03g01149 03 53966471 53968843 ECH