Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01146 ATGTTCCTCAAACTTGTGTTGTTGTGTTTTCTGGTTACAGTTGTAGCCATTGAAGACACCAATTTCACCTATAATGGATTCCAATCATCTCATTTATATCTTGATGGTATTGCTGAGTTAACCTCCAATGGCTTACTTAGACTTACCAATGACACAAAACAACAAAAGGGTCATGCTTTTTATCCAAATCCTATACTTTTCAAGAACAACATCAATGGAAGTGTGTTTTCTTTCTCAACAACTTTTGTATTTGCAATTAGACCTCAGTATGCAACTCTTAGTGGCCATGGAATTGTTTTTGTTGTTTCTCCAACAAAAGGGTTGCCATATTCACTTCCAAGTCAGTACCTTGGTCTCTTGAATGACACAAACAATGGAAACAGTAGCAACCATGTTTTTGGAGTTGAGCTTGATACTATTATGAGTAGTGAGTTTGGTGATATCAATGATAACCATGTTGGAATTGATATCAATGATTTGAAATCGGCTAATTCGACATTTGCAGGATACTATAACAGTGATGGAAAGTTCGAGAATTTGACACTTTTCAGTGGTTATCCTATGCAGGTTTGGATTGAATATGACGGTGAAAAGAAGAAGATTGATGTTACTTTAGCTCCTATTAAGGTCGATAAACCAAAACAACCTTTGTTATCATTGAAAAAAGATCTTTCTCCAATTTTGAATAGTTCTATGTATGTTGGATTTTCATCAGCTACTGGTTCAGTTTATACTTCTCATTATGTTCTTGGTTGGAGTTTTAAGGTTAATGGTGAAGCTCAAAAGCTTTTAATTTCTGAACTCCCTAAGCTACCAAGATTTGGTGAGAAAAAAGAGGACAAAATTTTAACTGTTGGGTTGCCTTTGATTTTGCTAAGTTTGGTTTTCATGATAACTTTAGGGGTTATTTATTTGATCAAAAGGAAGAAGATGTTTGCTGAGATTCTTGAAGATTGGGAACATGAGTATGGCCCACATAGATTTAAGTTCAAAGATCTTTACTTTGCCACAAAGGGTTTCAGGGAAAGGGAGCTTTTAGGAACCGGTGGATTTGGTAGGGTCTACAAAGGTGTGATGCCAGGTTCCAAAATTGAGGTAGCAGTGAAGAGAGTTTCTCATGAATCAAGACAAGGGATGAGGGAATTCGTGTCGGAAATCGTTAGCATTGGCCGTCTTCGACACAGGAATCTTGTTCCGCTTCTAGGCTATTGCAGGCGAAAAGGCGAGTTACTTCTGGTTTATGACTACATGCCGAATGGAAGCTTAGACAAATATTTATACAACCAACCAAACGTGAGCTTAAATTGGAGTCAAAGATTTCGAATCATTAAAGGGGTCGCTTCGGGTTTGTTTTATCTTCATGAACAATGGGAGCAAGTTGTGATTCACAGAGACATAAAAGCTAGCAATGTTTTAATAGATGGTGAATTGAATGGTAGGTTAGGTGACTTTGGTCTTGCAAGATTATATGATCATGGAACTGATCCTCACACAACTCATTTGGTTGGAACTGTTGGTTATTTAGCTCCTGAACATACAAGAACAGGTAAAGCTACTAAATTTTCTGATGTGTTTGCTTTTGGTGCATTTCTTCTTGAAGTTGTTTGTGGAAAGAGGCCAATAGAACATGTTGGTGAAAATGAGAGTGAAATTCTAGTTGATTATGTGTTTGAATGTTGGAAAAGAGGTGTGATTATTGAGGCAAAGGATGTAAATTTATGCACAGATTATAGTATTCAAGAAGTGGAATTGGTGTTGAAACTTGGTTTATTGTGTTCACATTCAGAACCTTTGGTTAGACCAAATATGAGGCAAGTTGTGCAGTATTTGGAGATGGATATAGCTTTGCCTGATTTGTCTTTGCTTAGTTTATCTTCTTCTGGTTTAACTTTTGGATACCGTGAATTTTTTGAGGATTTTCCATTGTCATATCCATCTGATATGGATAAGACATTCTCACATACTTCGGTGTCTATTACTGATTCACTTCTCTCTGGTGGTCGTTGA 2007 0.3677 MFLKLVLLCFLVTVVAIEDTNFTYNGFQSSHLYLDGIAELTSNGLLRLTNDTKQQKGHAFYPNPILFKNNINGSVFSFSTTFVFAIRPQYATLSGHGIVFVVSPTKGLPYSLPSQYLGLLNDTNNGNSSNHVFGVELDTIMSSEFGDINDNHVGIDINDLKSANSTFAGYYNSDGKFENLTLFSGYPMQVWIEYDGEKKKIDVTLAPIKVDKPKQPLLSLKKDLSPILNSSMYVGFSSATGSVYTSHYVLGWSFKVNGEAQKLLISELPKLPRFGEKKEDKILTVGLPLILLSLVFMITLGVIYLIKRKKMFAEILEDWEHEYGPHRFKFKDLYFATKGFRERELLGTGGFGRVYKGVMPGSKIEVAVKRVSHESRQGMREFVSEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPNVSLNWSQRFRIIKGVASGLFYLHEQWEQVVIHRDIKASNVLIDGELNGRLGDFGLARLYDHGTDPHTTHLVGTVGYLAPEHTRTGKATKFSDVFAFGAFLLEVVCGKRPIEHVGENESEILVDYVFECWKRGVIIEAKDVNLCTDYSIQEVELVLKLGLLCSHSEPLVRPNMRQVVQYLEMDIALPDLSLLSLSSSGLTFGYREFFEDFPLSYPSDMDKTFSHTSVSITDSLLSGGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01146 668 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 6 653 - -
Car03g01146 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 276 IPR013320 -
Car03g01146 668 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Car03g01146 668 SUPERFAMILY Protein kinase-like (PK-like) 321 618 IPR011009 -
Car03g01146 668 Gene3D - 18 268 - -
Car03g01146 668 SMART serkin_6 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01146 668 ProSiteProfiles Protein kinase domain profile. 340 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01146 668 PANTHER - 6 653 - -
Car03g01146 668 CDD lectin_legume_LecRK_Arcelin_ConA 20 258 IPR001220 GO:0030246
Car03g01146 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Car03g01146 668 Pfam Legume lectin domain 20 268 IPR001220 GO:0030246
Car03g01146 668 Pfam Protein kinase domain 341 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01146 668 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Car03g01146 668 Gene3D Transferase(Phosphotransferase) domain 1 417 621 - -
Car03g01146 668 CDD STKc_IRAK 346 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01146 Car-Chr3 53919749 53921972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01146 18 668 Receptor kinase-like Gene Family AT2G37710 64.832 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car03g01146 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01146 - - gmx:100783815 1029.24