Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01139 ATGAAGCTAGATGAGGATCTTGGTCCTGACCGTCAGGATGATTTTCAAACGGATGATGAAGAAAATCAAGCAGATAGGGTTTTTGAAAATTTGGATGATTCTGAATCAGATAATTCACCTCCTGCACGAAATTTATCCAATGAAATTTACTTTAATACCACATGGCCTCAAACCTATAGGACATCTATGGACATGTTAACAAATGTAAGTGTAACACCACCAGGAATAAGTTTCCTAAAGCTTATTGGATCAGCAGGGAAGAATAGTTACCTCTCTAAGGAATGCCATGATGATAATTCAAATTCATTGATTGTACCTCTTGTTTATGAGGAAACATCTGTCAAACAAGAGAAACCTACTTCAGTATCTCATGTTCAATCACTTATCAGCACTCCTAAAATTTCTGCCACTGAATTTCCACCAACACAGAGGCAATGTTCCTTTGCTCAATCAGTAATAAATGGAACCAATATATTATGTGGGATAGGAATGATGACCATTCCATATGCAATAAAAGAAGGAGGGTGGTTGAGCTTTTTATTACTGCTAATGTTTGCTGCGATTTGTTGCTATACTGGAATTTTATTGTTGAGATGTTTACAGAGCCATCCTGGAGTTAATAGTTATCCAGATATTGGCCAGGCTGCTTTCGGAATCGCTGGTCGATTGGGAATCTCGGTGAGTACAACAAGTCTTACATGCATTGCTTCTTGTGTTGAGTTTTTAATACTTGTAAGTGATAACCTCACATCACTTTTCCCCAATACATCCATGACCTTAGCAGGAACTCAACTTAGTTCACATCAAGTTTTTGCCATCACTGCAGCTCTTCTTGTTCTACCAACAGTTTGGTTGAAAAATCTAAGCCTGCTTTCATATATTTCAGTTGGAGGAATATTTGCAACATTACTTGTAGCACTATGCTTGTTTTGGGTTGGAGCTGTAGACCAAATTGGATTTAATCCAGGAGGAAAAATTTTAGACATTGAAAACCTATCTGTATCAATTGGTCTCTTTGGTTTTGGATTTGCTGGCCATGCAGTTTTTCCAAATGTCTACTCTTCCATGAAGGAGCCATCCAAATTCCCATTAGTTCTATATATCAGTTTTGCTTTCTGTCTTGTTATGTACGTAAGTGTAGGAACATATGGATATTTATTGTTTGGTGACTCAGTTGGATCTCAGTTTACCTTAAACATGCCCAAAACATTATATGCATCCAAAATAGCCAAATGGACAACTGTTGTGACCCCTTTGGCAAAATTTGCCTTAACATTATTGCCTATTTCATCAAGCATAGAGGAACTTGTACCCTCTCCTAGGCTAAGATGTTATGCTATGTCTATTCTTATCAGAACAATTTTAGTGATTTTAAGTTTAATTGTGGCCCTCTGTGTTCCATATTTTGGTTCTGTGATGGCACTAATTGGTTCTTTCATGTCAATGCTAGTTGCACTTATTTATCCATGTGCATGTTATCTCAAGCTACATAGGGGTAAATTATCAAATATCGAGATAATAAATTGCATTTTAATCATTATTGTGGGGTTGGTAAGCGCTATGGTAGGAACATATTCAGCAACTACAAGAATATTTGACGGCAGTGGAGACTAA 1614 0.3699 MKLDEDLGPDRQDDFQTDDEENQADRVFENLDDSESDNSPPARNLSNEIYFNTTWPQTYRTSMDMLTNVSVTPPGISFLKLIGSAGKNSYLSKECHDDNSNSLIVPLVYEETSVKQEKPTSVSHVQSLISTPKISATEFPPTQRQCSFAQSVINGTNILCGIGMMTIPYAIKEGGWLSFLLLLMFAAICCYTGILLLRCLQSHPGVNSYPDIGQAAFGIAGRLGISVSTTSLTCIASCVEFLILVSDNLTSLFPNTSMTLAGTQLSSHQVFAITAALLVLPTVWLKNLSLLSYISVGGIFATLLVALCLFWVGAVDQIGFNPGGKILDIENLSVSIGLFGFGFAGHAVFPNVYSSMKEPSKFPLVLYISFAFCLVMYVSVGTYGYLLFGDSVGSQFTLNMPKTLYASKIAKWTTVVTPLAKFALTLLPISSSIEELVPSPRLRCYAMSILIRTILVILSLIVALCVPYFGSVMALIGSFMSMLVALIYPCACYLKLHRGKLSNIEIINCILIIIVGLVSAMVGTYSATTRIFDGSGD 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01139 537 PANTHER OS05G0424000 PROTEIN-RELATED 40 531 - -
Car03g01139 537 Pfam Transmembrane amino acid transporter protein 145 526 IPR013057 -
Car03g01139 537 MobiDBLite consensus disorder prediction 1 45 - -
Car03g01139 537 PANTHER AMINO ACID TRANSPORTER AVT1D 40 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01139 Car-Chr3 53706205 53719346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01139 1 537 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.159 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01139 K15015 - qsu:112025453 595.119