Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01133 ATGATTGAGTCAGCTATGTCAAACACAATGATGGAGAAAGTAATTGCTTCTAATTGGTCAGAAGGGTCAGAAAAAGATGAACTTTTAAGAGAGCTTTTTGATGATGAGTCTCCTTTACTTATGTTGCCAGAGGAGACAATAACTAACATAAGTGATTCTTCAAAAGAACAAGCTTTTAATAAGTTCATTTCAAATATTTATTCAGGTCCTACCATTTTAGATATTGAAAATGCTTTGTCAGTTACTAACCATAGAGAACACTTTCCACAGCTTTCATCAACAAGAGTTTCCATATTGGAAAGGAGTTGGAGTAAGATTGAGAATAAGTACACATTGAAAATCAAATGCTTTGGAAATGGGATGGGTGATGATGGTTATAAGTGGAGGAAGTATGGACAGAAATCAATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGTGCCAAGAAGCAAGTTGAAAGATCCAATGAGGACCCTGACACTCTTATAATCACTTATGAAGGCCTCCATCTTCACTTTACTTATCCTTATTTCCTAGTGGGCCAATCTTCCCATCCACCAATCAAGAAGTCCAAGCCCACCTCTTCACAAGGCCAACAAGCCCAATGCCAAAAACCAAATCATGAAGCCCAAGCTAGTGGTTCTTTGGGACTCATATCACCCACTTTATTGGGCTCTACACAAGATACGGCCCAAGAAAATTTGGGCTCACAAGGGTTGCTCGAAGACATGGTGCCATTCATTGTTAGGAACCCCACAAACAATACCGATATTGATGATTTCTCAAAATTTTCATTTTCCTCACAAATATGTACCACTTCTACTTCCACCTCTTGCTATACTGTTGGCTTAAATTCTAGCATTTAG 888 0.3874 MIESAMSNTMMEKVIASNWSEGSEKDELLRELFDDESPLLMLPEETITNISDSSKEQAFNKFISNIYSGPTILDIENALSVTNHREHFPQLSSTRVSILERSWSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFTYPYFLVGQSSHPPIKKSKPTSSQGQQAQCQKPNHEAQASGSLGLISPTLLGSTQDTAQENLGSQGLLEDMVPFIVRNPTNNTDIDDFSKFSFSSQICTTSTSTSCYTVGLNSSI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01133 295 MobiDBLite consensus disorder prediction 194 218 - -
Car03g01133 295 ProSiteProfiles WRKY domain profile. 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01133 295 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 274 IPR044810 GO:0003700
Car03g01133 295 SUPERFAMILY WRKY DNA-binding domain 120 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01133 295 SMART WRKY_cls 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01133 295 Gene3D WRKY domain 118 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01133 295 Pfam WRKY DNA -binding domain 123 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01133 295 MobiDBLite consensus disorder prediction 193 218 - -
Car03g01133 295 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 22 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01133 Car-Chr3 53624828 53627780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01133 33 263 WRKY Transcription Factor Family AT5G43290 43.651 9.41e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g01133 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01133 - - gmx:100803946 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01133 03 53624828 53627780 Car03g01133 03 53624828 53627780 ECH