Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01129 ATGATGGATCCACATCTTAAAGGGTTTTGTGGTTCCAGAAATGAGATCCAGTTGGAGAATCAATCTTTGCCTGTTTTTCAGAATCAGAGATATGAAAATGTTTTTTTTTATCAAAGTAGGGAATTTGGTTTAGTCGAGTCTAATTTGATAACTGATACACCTTCTTTGACGACTTCGATCTCGACACACGAGGAACCTTATCCTGAGGATTGTGAATTTTCTGATGCTGTTTTGAGTTACATCAATAAGATTCTTATGGAAGAAGATATGGAGGATAAGACATGTATGCTTCAAGATTCTTTAGATCTTCAAATTGCTGAGAAATCGTTCTATGAAGTTATAGGTGAAAAGTACCCGGTTTCGCCATTAGGAAAATCTTCTAGTCTTAGTTATCAAAATGACGGAGTTGGTGATAATAACTTCATTGATAATTATTATGGTTCTTGTGTTGATGATGGTGATCTTAGTAGCATTTTTAATAACAATTATTTACGCGGAAACTCGATGGAAGTTCAATTTCCTCATCAAGATTTTATATTCAATAGCATTTCACAATCATCTTATAGCTCTACAAATAGTGTAAAAAGTACTGTGGAAGGGCCTTTGGACTCTCCAGACAGTATTTTACAGATCACTGATGGGAATAGTGAAAATCAACCGATTTTGCAATTTCAAAAGGGTGTTGAGGAGGCTAATAAGTTTCTACCTAGTGGAAAGGGATTCTTTCCTAATTTGGATGTTGCTAAGTACTCAATACTAGAGCCTAAAGTGATGAAAGATGAATTATCGGTTAAGGTGGAGAAGGATGATCAGAAGTCTTTTCTTTATGGTTCGAAGGGAAGGAAGCATCCTCATGGCGAAGAGGGAGACATCGAAGAAAATAGAAGCAACAAGCAAGCAGCGATTTACTCAGAGCCCACGTTGCGGTCAACTATGTTTGATATAATCCTGCTTCATAGTTTAGGAGATGGTAGGAATTATTTCATGGCTCGACGCGAGGCTTTGCAAACTAAGATCAAGATGATAAACCTGCCAAGCAGTAAATCAAAAAAAGCAACTAGTTGTGGTAAAGGACGAGGTAAAAAACAACATGGGAAAACAGAAGTTGTTGATTTGAGAACACTGCTGGTTCTTTGTGCACAAGCTGTTGCAGCAGACGACCATAAAAGCGCGCATGAGTTGCTTAAGCAGATCAGGCAGCACTCAAGTCCTTTCGGCGATGGAAATCAGCGTTTGGCTCATATGTTTGCTGATGGCCTCGAGGCGCGTTTGGCTGGTACAGGAAGCCAAATTTATAAAGGACTTATCAGTAAAAGAACGTCTGCTGCTGATTTGTTGAAAGCTTATCATCTTTACCTCACTGCTTGCCCTTTTCGGAAGATGACCAGTTTCGTCTCGAATATCTCTATAATGAGATCTGCAGCGAGTTCAATGAGGGTCCATGTTGTAGACTTCGGTATCCTCTACGGTTTCCAATGGCCTACCTTTATACAGAGACTTTCGATAAGACCAGGAGGACCGCCTAAACTTCGTATTACAGGAATAGACTTTCCACAACCCGGTTTCAGGCCTGCCGAGAGAATTAAAGAAACTGGTTCCCGCTTGGCAGCGTATGCTGAATCTTTTAATGTGCCATTTGAGTATAATGCCATAGCGAAAAAATGGGAAACCATTCAGCTTGAGGAACTCAAGATCGACAGGGATGAATACCTTGTTGTTACATGTTTTTACCGCGGTAAAAACTTGCTCGATGAATCTGTGGTAGTTGACAGTCCGAGGAATAAGTTCCTCAGTTTGATAAGGAAGATCAAACCTGATATATTCATTCATGGCATTATTAATGGAGCCTTTAACGCACCTTTCTTTGTTACTCGATTTAGGGAGGCATTGTTTCACTTCTCTTCGCTTTTTGATATGCTTGAATGTATTGTGCCTCGCGAGGATTGGGAAAGGATGTTAATTGAGAAGGAGATATTTGGGAAGGAAGCATTGAATGTTATAGCTTGTGAAGGTTGCGAGAGAGTAGAGAGGCCAGAGACGTATAGGCAGTGGCAAGTTCGTATTCTCCGAGCCGGGTTTTCTCAACGAGCATTCGACAAAAACACAGTAGAAAGAGCATTGGAGATTGTAAGGTCTAGGTACCACAAGGATTTTGTAATGGACGAAGACAGAAAGTGGTTATTGCAAGGTTGGAAGGGGCGAATAGTTTATGCGCTTTCTTGTTGGAAACCTGCTTGA 2238 0.4026 MMDPHLKGFCGSRNEIQLENQSLPVFQNQRYENVFFYQSREFGLVESNLITDTPSLTTSISTHEEPYPEDCEFSDAVLSYINKILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPVSPLGKSSSLSYQNDGVGDNNFIDNYYGSCVDDGDLSSIFNNNYLRGNSMEVQFPHQDFIFNSISQSSYSSTNSVKSTVEGPLDSPDSILQITDGNSENQPILQFQKGVEEANKFLPSGKGFFPNLDVAKYSILEPKVMKDELSVKVEKDDQKSFLYGSKGRKHPHGEEGDIEENRSNKQAAIYSEPTLRSTMFDIILLHSLGDGRNYFMARREALQTKIKMINLPSSKSKKATSCGKGRGKKQHGKTEVVDLRTLLVLCAQAVAADDHKSAHELLKQIRQHSSPFGDGNQRLAHMFADGLEARLAGTGSQIYKGLISKRTSAADLLKAYHLYLTACPFRKMTSFVSNISIMRSAASSMRVHVVDFGILYGFQWPTFIQRLSIRPGGPPKLRITGIDFPQPGFRPAERIKETGSRLAAYAESFNVPFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRGKNLLDESVVVDSPRNKFLSLIRKIKPDIFIHGIINGAFNAPFFVTRFREALFHFSSLFDMLECIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQVRILRAGFSQRAFDKNTVERALEIVRSRYHKDFVMDEDRKWLLQGWKGRIVYALSCWKPA 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01129 745 MobiDBLite consensus disorder prediction 275 294 - -
Car03g01129 745 ProSiteProfiles GRAS family profile. 363 743 IPR005202 -
Car03g01129 745 PANTHER SCARECROW-LIKE PROTEIN 9 55 744 - -
Car03g01129 745 Pfam GRAS domain family 372 743 IPR005202 -
Car03g01129 745 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 744 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01129 Car-Chr3 53348811 53351976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01129 69 744 GRAS Transcription Factor Family AT2G37650 52.319 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car03g01129 GRAS 1.6e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01129 - - gmx:100807788 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01129 03 53348811 53351976 Car03g01129 03 53348811 53351976 ECH
Car03g01129 03 53348811 53351976 Car06g03597 06 67326634 67329308 ECH