Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01124 ATGGGTGCTTGCTGGAGCAATAAGGTTAAATCTGTGAGTCCTTCAACCACAGGTTTCACTTCTAGAAGTGTAAGCAGAAGTGGCCATGACATTAGCTCAACTAGCAGGAACTCATCAGCCTCCATATCTGTCACTTCTCGAAGCGAGGGTGAAATCTTGCAATCTTCCAACTTGAAAAGCTTCAGCTACAATGAGCTAAGAGCAGCCACGAGAAATTTCCGGCCAGATAGTGTTTTAGGGGAGGGTGGTTTTGGTTCAGTTTTTAAGGGATGGATCGATGAACATTCTCATGCTGCAACCAAACCAGGAATGGGCATTATTGTTGCCGTGAAGAAGCTTAACCAAGAAGGGTATCAGGGTCACAGAGAATGGTTGGCTGAAATCAACTATCTCGGGCAACTTCAGCATCCTAATCTTGTCAAATTAATAGGATACTGCTTTGAGGATGAGCATCGGCTTCTGGTTTATGAGTTTATGCCCAAGGGAAGCATGGAGAATCATCTCTTCAGACGAGGTTCTTATTTTCAGCCATTCTCTTGGAGTTTGCGAATGAAAATAGCTCTCGGGGCTGCAAAAGGTCTTGCATTTCTCCATAGTACGGAACCTAAAGTCATATACCGTGACTTCAAAACATCGAATATACTGCTTGATTCTAAATATGATGCGAAGCTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAACTGGTGATAAAAGTCATGTCTCTACTCGTGTCATGGGAACTCGTGGATATGCAGCACCAGAGTATCTAGCAACAGGCCATCTTACTGCGAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCGGGAAGACGAGCCATAGACAAGAATCTTCCATCTGGAGAGCACAACCTAGTTGAATGGGCCAAGCCTTATCTATCCAACAAACGCAGAGTTTTTCGCGTGATGGATCCACGACTCGAAGGTCAATATTCACATACCCGAGCTCATGCTGCAGCTGCCCTTGCTTCTCAATGTCTTTCTGTAGAGCCTAGGATCAGGCCGAATATGGACGAGGTTGTAAAAACACTGGAGCAGCTTCAGGAACCGAAGGAAACACAGAAGAAAGGCGCTGATCATCGTGTTCGCTATCCCGGGCTCGGCAACAACTCATCTGGCAAAGGTAATGCAGATGCTTCTAGAAAGGCTTCTGCTTATCCTAGGCCTTCTGCTTCTCTCCTTCATGTTTGA 1224 0.4526 MGACWSNKVKSVSPSTTGFTSRSVSRSGHDISSTSRNSSASISVTSRSEGEILQSSNLKSFSYNELRAATRNFRPDSVLGEGGFGSVFKGWIDEHSHAATKPGMGIIVAVKKLNQEGYQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDSKYDAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNLPSGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHTRAHAAAALASQCLSVEPRIRPNMDEVVKTLEQLQEPKETQKKGADHRVRYPGLGNNSSGKGNADASRKASAYPRPSASLLHV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01124 407 MobiDBLite consensus disorder prediction 8 46 - -
Car03g01124 407 Gene3D Transferase(Phosphotransferase) domain 1 159 377 - -
Car03g01124 407 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01124 407 ProSitePatterns Protein kinases ATP-binding region signature. 79 112 IPR017441 GO:0005524
Car03g01124 407 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01124 407 MobiDBLite consensus disorder prediction 1 46 - -
Car03g01124 407 PANTHER KINASE 1B 22 392 - -
Car03g01124 407 MobiDBLite consensus disorder prediction 361 407 - -
Car03g01124 407 PANTHER OS01G0588500 PROTEIN-RELATED 22 392 - -
Car03g01124 407 SUPERFAMILY Protein kinase-like (PK-like) 40 355 IPR011009 -
Car03g01124 407 CDD STKc_IRAK 79 358 - -
Car03g01124 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Car03g01124 407 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01124 Car-Chr3 53223731 53227288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01124 27 355 Glycoside Hydrolase AT3G07070 47.748 2.80e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car03g01124 Pkinase 9.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01124 - - gmx:100819620 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01124 03 53223731 53227288 Car03g01124 03 53223731 53227288 ECH