Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01119 ATGGCTGAGTTAAAATTAGAGGAGTGTTGTATGGAGAATAAGCAATCTACTGTTGCTTCTTGCTCCTCTGCGTCTGAAGGCAGTGGCAGTGCAATTCACAAGTCTCCTGGGATATGTAGCCCGACATCAACATCGCCCCCACATAGGAGGACAACAGGTCCTATAAGGCGTGCTAAGGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGGAATGCTGTTGCAGCTTTTAAGGGAAAAACTGAGTTTTTTCCCGATCGATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTCCTTAATCCAGAACTTGTTAAAGGACCATGGACACAGGAGGAGGATGATAAAATTGTTGAACTGGTGTCAAAATATGGGCCTACAAAATGGTCCTTGATTGCCAAGTCTTTGCCTGGTCGAATAGGGAAACAGTGTCGAGAGCGGTGGCACAATCATCTTAATCCTGAAATAAAGAAGGATGCGTGGACTTTGGACGAGGAATTAGCCTTGATGAATGCTCATCGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCCTGGAAGGACTGACAATGCCATAAAGAACCACTGGAATAGTTCTTTGAAGAAGAAGCTGGATTTTTACTTGGCCACAGGAAAACTTCCACCAATTCCAAAACACACTCCACTAGCTTCTGCCAAAGATCCAATTAGACGTTTTGCTACTAAAACAATACCTGTTTCTTCTAATAAAGAATTAAATGTAGCTGTCGAAACATCGTCGGAAACTACAGCCATTAGTAAGCCAGATGACGGTGGCAAGAACCAGTTTGAGTCCTCAGGAACAGCTAGAGAAGTTGGCGATTCATCAAGTGTCCCTGCAATTGAATCTACTGATTCTGACTGTGCTGAATGTAGGCCTGAAACTTCCAACATTGATCTTAGCTGTGGAAACTCAGAACAAATCTCAAGAGCTAATTTTGGAACAATGTATGGGCCGAAATCCGAAAATTCTGCACTCAATGGAAACTCAATAAATGGGCATTGTTTAAATGGTAAAATGAGCAATAGCAGTAGCAGGTTAATCACGACATCTGCACAAGAAAATCAGACATGTGGTTCTTTGTGTTACGAGCCACCTCTTTTGGCTGGTTCAGTTCCTTTAGATTCTCTTCATTTAAGTATTCTCTGCATGCAGAATGAGTATTGTTCTAAGTTGTCACCGATGGGTTTCATCACACCACCTCGTGGGAGGGATAGTGAATTATGTACAGAGACCCCTGAATCAATATTGAAAAAGGCTGCTAATACTTATCCTAACACTCCTTCCATATATAGGAGGAGAAAAACTGGAGTCCAAGCAATTACTTCTCCAAGTAAATTTTTGAAAGTAGATAATGATTCACATGCTTCTAATGATCCGGATAAAACCAAAAATAATTCTGGTTCTGAAGTTCAGACATTATCGGAGAGTCCCGCAAGCCATGGAAAGAAGAGTGTTATTCTCAATAATAAGGCGTTCAATGCATCTCCACCATACCGGTTAAGAACTAAACGAACAGAAGTTGTCAAGTCTGTGGAGAAACAACTTGAGTTTGCATTTGACAAAGAGAAGAATGATGACAGTATGAACACAGTGGAAAAATCTGCAAAGAGGAGCAATGTTTTGACTGAGGATTGCCTGCATGAAAGAAAATTGGTTGTGACGTAG 1695 0.4147 MAELKLEECCMENKQSTVASCSSASEGSGSAIHKSPGICSPTSTSPPHRRTTGPIRRAKGGWTAEEDETLRNAVAAFKGKTEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPEIKKDAWTLDEELALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGKLPPIPKHTPLASAKDPIRRFATKTIPVSSNKELNVAVETSSETTAISKPDDGGKNQFESSGTAREVGDSSSVPAIESTDSDCAECRPETSNIDLSCGNSEQISRANFGTMYGPKSENSALNGNSINGHCLNGKMSNSSSRLITTSAQENQTCGSLCYEPPLLAGSVPLDSLHLSILCMQNEYCSKLSPMGFITPPRGRDSELCTETPESILKKAANTYPNTPSIYRRRKTGVQAITSPSKFLKVDNDSHASNDPDKTKNNSGSEVQTLSESPASHGKKSVILNNKAFNASPPYRLRTKRTEVVKSVEKQLEFAFDKEKNDDSMNTVEKSAKRSNVLTEDCLHERKLVVT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01119 564 Gene3D - 159 218 - -
Car03g01119 564 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Car03g01119 564 PANTHER MYB PROTEIN-RELATED 18 477 - -
Car03g01119 564 MobiDBLite consensus disorder prediction 452 492 - -
Car03g01119 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 100 IPR017930 -
Car03g01119 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 207 IPR017930 -
Car03g01119 564 Gene3D - 106 157 - -
Car03g01119 564 MobiDBLite consensus disorder prediction 254 292 - -
Car03g01119 564 MobiDBLite consensus disorder prediction 23 56 - -
Car03g01119 564 MobiDBLite consensus disorder prediction 470 492 - -
Car03g01119 564 ProSiteProfiles Myb-like domain profile. 54 100 IPR001005 -
Car03g01119 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 156 IPR017930 -
Car03g01119 564 CDD SANT 62 100 IPR001005 -
Car03g01119 564 CDD SANT 108 152 IPR001005 -
Car03g01119 564 SMART sant 157 205 IPR001005 -
Car03g01119 564 SMART sant 105 154 IPR001005 -
Car03g01119 564 SMART sant 58 102 IPR001005 -
Car03g01119 564 CDD SANT 160 203 IPR001005 -
Car03g01119 564 PANTHER MYB-RELATED PROTEIN B-LIKE 18 477 - -
Car03g01119 564 Gene3D - 58 105 - -
Car03g01119 564 SUPERFAMILY Homeodomain-like 59 104 IPR009057 -
Car03g01119 564 MobiDBLite consensus disorder prediction 254 301 - -
Car03g01119 564 MobiDBLite consensus disorder prediction 23 50 - -
Car03g01119 564 Pfam Myb-like DNA-binding domain 59 100 IPR001005 -
Car03g01119 564 Pfam Myb-like DNA-binding domain 106 152 IPR001005 -
Car03g01119 564 Pfam Myb-like DNA-binding domain 158 201 IPR001005 -
Car03g01119 564 ProSiteProfiles Myb-like domain profile. 101 152 IPR001005 -
Car03g01119 564 SUPERFAMILY Homeodomain-like 103 199 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01119 Car-Chr3 53142142 53147879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01119 2 543 MYB Transcription Factor Family AT3G09370 46.975 7.10e-141 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g01119 Myb_DNA-binding 4.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01119 K09422 - gmx:100793280 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01119 03 53142142 53147879 Car03g01119 03 53142142 53147879 ECH