Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01118 ATGGCTGCTTCTCCAAAAACCGAAAACAAACTCTTTAACAATTCCATTTCAGTTTCAAAAGTAAGAGTCATAGTTAGGGTAAGACCCTTTCTTGGTCACGATAATGGCGACCCAGTTTCTTGTATTTCACTTTTGGATCAAGATTTTGAATCTCAACATCAAGAAGTAGCGGTTTATCTCAAAGACCCACAAACCAGTCGTAACGAGTGTTATCAATTGGACTCTTTCTTTGATAAAGAAGACAACAATGTGAGTAAGATATTTTACAGAGAAGTAAACCCTATGATACCTGTTATCTTCAGTGGCTGCAATGCTACAGTTTTTGCTTATGGGGCTACTGGTAGTGGCAAGACATACACTATGCAGGGAACTGAGGAACAACCTGGCTTAATGCCACTGGCAATGTCGATGATCCTGTCCATTTGTCAAACTACAGGCAGCACAGCACATATTTCATACTATGAGGTCTACATGGACCGATGTTATGATCTCTTAGAGGTAAAAGCAAAGGAGATTTCAATTTTGGATGACAAAGACGGTCAAATTCACCTCAAGGGACTATCTAAGGTTCCTATAAACACAATGTCTGAATTTCAAGAGGTTTTTTCTAGTGGTGTTCAGAGGCGCAAAGTTGCACACACAAGCCTCAACGATGTATCGAGTAGGAGTCATGGAGTGCTTGTAATATCTGTAGTATCCAATCCTTCTGATGGAACTGGAAGTCATGTATGTGGAAAGTTGAATCTCATAGACTTGGCAGGTAATGAAGACAACAGAAGGAGCTGCAGTGAAGGGATTCGTCTTCAAGAGAGTGCCAAGATAAACCAGTCCTTGTTTGCACTGTCAAATGTGATATATGCATTGAACAACCACAAACCAAGAGTGCCCTATAGAGAAAGCAAATTGACCCGAATATTGCAGGACTCTCTAGGAGGAACTAGTCGCGCACTTATGGTTGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTAGATCACGGCACATCTCTAATTTTGTACCTTCAGCTCATAAACAAGAGACTCCAAAAGTTAAAGTTGACATGGAAGCAAAATTGAGAGCATGGCTAGAATCAAAAGGCAAGACAAAGAGCTCACAAAGACTTGGAGTATTTAATTCTCCACTTGTGAAAAAAACTCCTAGTTCCATCATTCCCTTTGCAAAAAGATCGGTTAATTTCAACAATTCAGTGAAAGGGGGAACAACTTTCATCAACCAAGATGCTCAACACACTATGGAAAGGGCCCTTGCTGTTGATTTTAGAAATTTACTAGATGGTGAAGTTGCTTTTGACTCTTGCAAGGATGATGAGAACCTGCATTCTGGTGTTAAGCACAATGATGAGAGAGAGACTGAGCATGAGGCTGCATCGGAATCAGATAAAAATCTATCTGATGCAGTACTACAAAGTCCATTAAGAAAAGCCCTCTCCCCCATCAACATCAATGGTAACAAAAAGCCCCTTGAAGCTTTGTCTTTAACACCAACACCTTTTTCTGCAACCTGCTCCACTAATAAAGGGTTTGAGAAAAATGGCACTCCACTTGACAAATTCAGTACAAGAAGTTCCACATTGAAGAAATGTCTAGTTCAAGAATACATTCAATTGTTAAATAATGCAAGCAGAGAGGAACTACTAGAGTTAAAGGGTATAGGAGAGAAAATGGCAGAATACATAATAGACCTCAGAGAAGAAAGTCCAATAAAATCGTTAAGTGACTTGGAGAAGATTGGTCTCTCTTTGAAGCAGGCACATAACTTGTTCACTAAAGCTGCAAAGAAACTATTTGAAGATAAAGCAGAAGATTCAATAGTCAATTAA 1863 0.3967 MAASPKTENKLFNNSISVSKVRVIVRVRPFLGHDNGDPVSCISLLDQDFESQHQEVAVYLKDPQTSRNECYQLDSFFDKEDNNVSKIFYREVNPMIPVIFSGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSMILSICQTTGSTAHISYYEVYMDRCYDLLEVKAKEISILDDKDGQIHLKGLSKVPINTMSEFQEVFSSGVQRRKVAHTSLNDVSSRSHGVLVISVVSNPSDGTGSHVCGKLNLIDLAGNEDNRRSCSEGIRLQESAKINQSLFALSNVIYALNNHKPRVPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHISNFVPSAHKQETPKVKVDMEAKLRAWLESKGKTKSSQRLGVFNSPLVKKTPSSIIPFAKRSVNFNNSVKGGTTFINQDAQHTMERALAVDFRNLLDGEVAFDSCKDDENLHSGVKHNDERETEHEAASESDKNLSDAVLQSPLRKALSPININGNKKPLEALSLTPTPFSATCSTNKGFEKNGTPLDKFSTRSSTLKKCLVQEYIQLLNNASREELLELKGIGEKMAEYIIDLREESPIKSLSDLEKIGLSLKQAHNLFTKAAKKLFEDKAEDSIVN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01118 620 SUPERFAMILY RuvA domain 2-like 546 591 IPR010994 -
Car03g01118 620 MobiDBLite consensus disorder prediction 449 474 - -
Car03g01118 620 Gene3D - 537 608 - -
Car03g01118 620 Pfam Kinesin motor domain 26 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g01118 620 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car03g01118 620 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 11 619 - -
Car03g01118 620 MobiDBLite consensus disorder prediction 449 478 - -
Car03g01118 620 ProSiteProfiles Kinesin motor domain profile. 20 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g01118 620 CDD KISc_KID_like 21 341 - -
Car03g01118 620 SMART kinesin_4 18 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g01118 620 Pfam Helix-hairpin-helix motif 551 573 IPR000445 GO:0003677
Car03g01118 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 369 IPR027417 -
Car03g01118 620 Gene3D Kinesin motor domain 17 383 IPR036961 -
Car03g01118 620 PANTHER BNACNNG40390D PROTEIN 11 619 - -
Car03g01118 620 PRINTS Kinesin heavy chain signature 102 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g01118 620 PRINTS Kinesin heavy chain signature 214 231 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g01118 620 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g01118 620 PRINTS Kinesin heavy chain signature 295 316 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01118 Car-Chr3 53097879 53103908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01118 20 375 Calmodulin-binding Proteins AT5G65930 33.060 2.11e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01118 K10403 - gmx:100804591 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01118 03 53097879 53103908 Car03g01118 03 53097879 53103908 ECH