Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01113 ATGGGTAACAAAATCGGAAAGCTCTGCCTCTGTTCCGCCGGCGACGGCGCCGGAGACATCTTCGGCAGGTGGCAAAACAGATATACCTTCCTGTCCAAGAAACAAGACAAAGCTATTTGCAACTCCATCTGTTATGTCCGACCAAACCCACCTCGAATCTCTGGAGAAACATTCTCCGAAGACGATGTTGAAACCGTCGTGACTTTCCGGTCAGTCGCCGGAGCCACCGTTAGTGCAAACCCTTCATCAACACCTTCCATTTTCCTTGATGACTCTCTTCAACACAGCACTGTTTTGGATTCCTCTGCTTCATTTGAAAGCTTTGGTTCCTTCACTTCCAAAATGGTTCCTTTGCAACATCATCATCAACATGAAAAAGGGTTATCTTGGAATCCTTTTGAACCTGTTTTGAATGGTGATTCTGATTCTATTAAAAAAGGTTCAGAAAGGGTTATCTCTCATAATGGATTTAGAAAAAAGCCTTCTAAGATCAGCTTGAAGAAAATTCTGAGAAGAGCTTTTTCCTATGCAGTATCTCTTGGAAAAAGATCAATTCTTAAGAAAAATAATAATGGCaatgcaaacgcaaatgcaaatgcaaatgcaaatgctaatgcaaatgcaaGAGTAAGTTGTAGTACTAGTTTGAGTGATGAATTAAATGAAAAAAATAAATATTTGgatgatgatgatgatggatcatgtggatgtgatTTGTTAATGGTGTGTGAGAATTTTCATTGGGCTCAAGGGAGAGGTGGTGAGGATCGTGTACATATTGTGATATGTGAGGATCATGGATGGGTTTATGTAGGAATTTATGATGGATTCAACGGTCCTGATGCAACTGATTATCTTCTGAACAATATGTTTTGTGTTGTACACGATCAACTCAAAGGGTTTCTTTGTAGTCAAAATTTCTCAGATGATGATGTGTTGGAAGGTCTTTCAAAAGCAATGAGGAAAACTGAGGATGCATTTTTGAAGATAGGTGATGAGATGATTAGTCACAATCCTGTTTTGGCTATGATGGGTTCATGTGTTTTGGTAATGTTGATGAAAGGTGAAGATGTTTATTTCATGAATGTTGGAGATAGTCGTGCTGTTTTAGCTACTCACATTGGGAATCCAATTCAGCTTACAATGGATCATAGTACTCATGTCAAAGAGGAGGTTTCTAGAATTAGACAAGAGCACCCTGACGACCCTTGTGCAGTAACTAAAGGCAGGGTGAAAGGTTACTTGAATGTCACTAGGGCTTTTGGCGCAGGGTTCCTTAAACAGCCTAAACAAAATGATGCAATGTTAGAGACTTTCAAAGTTAGTTACATAGGGGAATCACCATATATCACATGCTCGCCTTCACTACACCACCAAAGGCTGAGCTCAAATGACAAATTTCTTATACTTTCTTCTGATGGACTTTACCAATACTTCACCAATGAAGAAGCAGTTGCCAAAGTAGAGTCATTCATCACCATGTTTCCTGATAAAAATCCTGCTCAACTTCTCATTGAAGAAGCACTAAGTCAAGCAGCCAAAAAAGCCGGCATTGAGTTCCATGAGTTGCTTGATATACCACAAGGGGAAAGACGTTTATACCATGATGACATTTCCATTGTCATAATATCCTTGGAGGGAAAAGTATGGCGTTCATTAATGTAA 1665 0.3772 MGNKIGKLCLCSAGDGAGDIFGRWQNRYTFLSKKQDKAICNSICYVRPNPPRISGETFSEDDVETVVTFRSVAGATVSANPSSTPSIFLDDSLQHSTVLDSSASFESFGSFTSKMVPLQHHHQHEKGLSWNPFEPVLNGDSDSIKKGSERVISHNGFRKKPSKISLKKILRRAFSYAVSLGKRSILKKNNNGNANANANANANANANARVSCSTSLSDELNEKNKYLDDDDDGSCGCDLLMVCENFHWAQGRGGEDRVHIVICEDHGWVYVGIYDGFNGPDATDYLLNNMFCVVHDQLKGFLCSQNFSDDDVLEGLSKAMRKTEDAFLKIGDEMISHNPVLAMMGSCVLVMLMKGEDVYFMNVGDSRAVLATHIGNPIQLTMDHSTHVKEEVSRIRQEHPDDPCAVTKGRVKGYLNVTRAFGAGFLKQPKQNDAMLETFKVSYIGESPYITCSPSLHHQRLSSNDKFLILSSDGLYQYFTNEEAVAKVESFITMFPDKNPAQLLIEEALSQAAKKAGIEFHELLDIPQGERRLYHDDISIVIISLEGKVWRSLM 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01113 554 SUPERFAMILY PP2C-like 253 546 IPR036457 -
Car03g01113 554 ProSiteProfiles PPM-type phosphatase domain profile. 239 545 IPR001932 -
Car03g01113 554 Pfam Protein phosphatase 2C 268 514 IPR001932 -
Car03g01113 554 Gene3D - 214 551 IPR036457 -
Car03g01113 554 PANTHER PROTEIN PHOSPHATASE 2C 305 553 IPR015655 GO:0004722|GO:0006470
Car03g01113 554 PANTHER PROTEIN PHOSPHATASE 2C 19 301 IPR015655 GO:0004722|GO:0006470
Car03g01113 554 SMART PP2C_4 239 543 IPR001932 -
Car03g01113 554 CDD PP2Cc 254 545 IPR001932 -
Car03g01113 554 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 19 301 - -
Car03g01113 554 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 305 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01113 Car-Chr3 53017999 53020970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01113 1 552 PP2C-type Phosphatase Gene Family AT1G07630 42.669 5.56e-162 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01113 - - dcr:108210844 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01113 03 53017999 53020970 Car03g01113 03 53017999 53020970 ECH