Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01112 ATGCCTTTGTCTCCTTATTCCAACTTCATAACTATAACCACCAACCTTCGTCTTCGCACTCTATTCATCTTAATCAGAAAATGGACCATAAAACATTACTCAATCGCCGCATTCGGTTTATTCCTTTTattctcattcgtttttctcattcgatccaattcccattcccaatatgacactcactccctcctcaatttcattcCCTTCACCCCTCTCACTAACGCCAAACAAATCGGCGCTCTTTGCTTGGATGGGACTGCTCCTGGTTACCATTTTCAAAAGGGTTTTGGATCTGGATCCACTAATTGGTTGCTCCACGTCGAGGGAGGAGGGTGGTGCAATTCGATATCTTCATGTTCTTATAGAAAAATGACTGCTTTGGGATCATCTAAGTATATGAATACAACAGTTCTTTTTTCAGGGATACTAAGCTCTGCCCCCTCTGAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTACTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGCAGAAAGGAAGTGGGTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCGAAACAGGCTCTGTTGTCAGGATGCTCTGCTGGAGGATTGGCAACTCTTATACATTGTGATAGCTTCCGACAACTACTTTCGAAAGAGGCCACTGTCAAGTGTCTCGCTGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTTGGAAATAGCACAATGAAATCTTTCTATCACGAAGTTGTCCAGCTCCAGGGTGTTGCAAAAAGTTTGCACATAGATTGCCTTGCTAAAATGGAACCATCTAAGTGTCTCTTTTCATCAGAAATTCTGAAAAACATAAAGACTCCTGTTTTTCTTGTTCATCCAGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTGAAGGATCAGATCCCCACGGTCGCTGGAAAAGCTGCAGATTAAACATTAACAATTGTGATGCTAACCTGATTGATATACTTGACAGTTTCCGCAATTCTTTGCTGAAGACTGTGAATGAATTCCAGCAACGAAAAGAGATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTTGATGGGGGAGACATGGCATTCACCTAACTCTCCAAAAATAAACGATAAGACAATTGCTGAATCAGTTGGCGATTGGTTCTTTGACCGACAAGTGGTAAAGCTTATTGACTGCCCTTATCCATGTAATCCTACGTGCCATAATATGGATTTCACCAAAGTATAA 1305 0.3893 MPLSPYSNFITITTNLRLRTLFILIRKWTIKHYSIAAFGLFLLFSFVFLIRSNSHSQYDTHSLLNFIPFTPLTNAKQIGALCLDGTAPGYHFQKGFGSGSTNWLLHVEGGGWCNSISSCSYRKMTALGSSKYMNTTVLFSGILSSAPSENPDFFNWNKVKIRYCDGASFAGHPESEQKGSGLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGGLATLIHCDSFRQLLSKEATVKCLADAGFFLDEKDILGNSTMKSFYHEVVQLQGVAKSLHIDCLAKMEPSKCLFSSEILKNIKTPVFLVHPAYDFWQIHNILVPEGSDPHGRWKSCRLNINNCDANLIDILDSFRNSLLKTVNEFQQRKEIGMFIDSCFIHCQTLMGETWHSPNSPKINDKTIAESVGDWFFDRQVVKLIDCPYPCNPTCHNMDFTKV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01112 434 PANTHER NOTUM-RELATED 28 427 IPR004963 GO:0016787
Car03g01112 434 Pfam Pectinacetylesterase 67 412 IPR004963 GO:0016787
Car03g01112 434 PANTHER PECTIN ACETYLESTERASE 4 28 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01112 Car-Chr3 53008435 53014445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01112 26 398 Carbohydrate Esterase AT3G09410 58.005 1.24e-164 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01112 K19882 - gmx:100792819 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01112 03 53008435 53014445 Car03g01112 03 53008435 53014445 ECH