Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01109 atGTCTCCAACAGCTTCATCAAGATGGAGCCCTACAACAGAACAACTCATGATCTTAGAGGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTTCACAAATTCAGCAAATAACAACTCACCTTTCTTTCTATGGTAGAATAGAAGGAAAAAATGTTTTCTATTGGTTTCAGAACCATAAGGCTAGGGATAGGCAGAAACTTAGAAGGAAACTTaacaaacaaatgcaactacagcaacaacaacagcaacaacagcaactacaaGTTCATCATTGCCAAATCAATCATGATAATAATGTGATGATTAATAATAACCATTTTGTTGGTACTTTTGGTTACCCTTTTGGATCTATTACACAAGACATTTCCTTTTTTAACTCACCTAGCTTGCTTTTTGAGGGAGTAGCTGCAAACACATCAGAAGGGAGAGTCAATTGCAAAAGGAATTGTTATAACCAACAAAGTTTGGTGGAGAAGAATGATAATATTGCATTAAGTAACTATGGTTGGAAACTTGTGGATGTTAATCATGAAACATCTTCATGTTGCACTAGACCTCTCAAGACTCTTGATCTTTTTCCACTCACAACAACAAGAATCAAAGAAGATTGCACAACATCAACCAAAACCCAAAATTCtatgtga 648 0.3241 MSPTASSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQMQLQQQQQQQQQLQVHHCQINHDNNVMINNNHFVGTFGYPFGSITQDISFFNSPSLLFEGVAANTSEGRVNCKRNCYNQQSLVEKNDNIALSNYGWKLVDVNHETSSCCTRPLKTLDLFPLTTTRIKEDCTTSTKTQNSM 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01109 215 Coils Coil 65 89 - -
Car03g01109 215 Pfam Homeodomain 6 66 IPR001356 GO:0003677
Car03g01109 215 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 208 IPR044555 GO:0003700|GO:0099402
Car03g01109 215 CDD homeodomain 8 67 IPR001356 GO:0003677
Car03g01109 215 SMART HOX_1 4 71 IPR001356 GO:0003677
Car03g01109 215 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Car03g01109 215 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Car03g01109 215 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 208 - -
Car03g01109 215 Gene3D - 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01109 Car-Chr3 52976051 52977249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01109 1 206 Wox Gene Family AT2G28610 41.736 7.42e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car03g01109 Homeodomain 6.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01109 - - cam:101510991 387.111