Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01099 ATGAAAAAAGAAGATTCAACTTTTGACCTAAAAATGGATGATGAATTCCAAAAGGGAACAGGACCAAAAAGGTTTTGTTACAATAAATTGGCGAGTGCAACAAATAACTTTGAAGAATCACAAAAGATTGGACAAGGTGGTTTTGGTGGTGTTTATAAAGGCTATTTAAAAGACATAGATTCAAATGTTGCTATAGAGAGACTATCAAGAGAATCCAAACAAGGAATAAAGGAATATGCAACTGAAGTGAAAATCATTAGCCAACTAAGGCATAGAAATTTAGTACAACTAAATGGTTGGTGTCATAGAAAAAAAGACTTACTCCTTATATATGAATTCATGCAAAATGGTAGCTTAGATTCACACTTATATCGCGGAAAAAGCGTATTAGCATGGCACATGAGGTACAACATTGCAATGGATTTAGCTTCAGCGTTGTTGTATCTTCATGAAGAATGGGAACAATGCGTGCTACATAGAGACATTAAATCAAGCAACATTATGTTGGACACAAATTTCAATGCTAAAGTCGGCGATTTCGGGTTGGCAAGACTAGTTGATCATGAAAAAGGCTCACAAACAACAGTTATAGCTGGTACAATGGGATATTTAGCACCTGAATATTTCACAACAGGTAAAGCTACAAAGGAATCTGATATATATAGTTTTGGAATTGTTTCATTGGAGTTAGTTAGCGGAAGAAAACCAGTTGATCTTAATGCAAAGGAAGACCAAATGGCTATATATGATTGGGTTTGGGAACTTTATAGATTAGGAAGGTTTGTTGAAGTTGTTGATACAAAACTTGGGGGTGTGTTTGATGAGATGAAAATGGAACGTTTAGTTGTTGTTGGTCTTTGGTGTGCTAATCCTAATTATTCATTAAGGCCAAGTGTTAGACAACTGATTCAAGTGCTTAAATTTGAAGCTGCTTTACCAATTCTACCCCTGCAAAAGATGAATGATTCAAGTTATTATGCTCCTACAAAAATGAACACAGTTTTTGGTCCAGTTTCTTCTTCCTCTGCAGTTTATTCATACCCGATCTGTGTCTAG 1056 0.3532 MKKEDSTFDLKMDDEFQKGTGPKRFCYNKLASATNNFEESQKIGQGGFGGVYKGYLKDIDSNVAIERLSRESKQGIKEYATEVKIISQLRHRNLVQLNGWCHRKKDLLLIYEFMQNGSLDSHLYRGKSVLAWHMRYNIAMDLASALLYLHEEWEQCVLHRDIKSSNIMLDTNFNAKVGDFGLARLVDHEKGSQTTVIAGTMGYLAPEYFTTGKATKESDIYSFGIVSLELVSGRKPVDLNAKEDQMAIYDWVWELYRLGRFVEVVDTKLGGVFDEMKMERLVVVGLWCANPNYSLRPSVRQLIQVLKFEAALPILPLQKMNDSSYYAPTKMNTVFGPVSSSSAVYSYPICV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01099 351 PANTHER LECTIN RECEPTOR KINASE 2 346 - -
Car03g01099 351 SMART serkin_6 37 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01099 351 PANTHER - 2 346 - -
Car03g01099 351 Gene3D Transferase(Phosphotransferase) domain 1 114 327 - -
Car03g01099 351 Pfam Protein kinase domain 37 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01099 351 SUPERFAMILY Protein kinase-like (PK-like) 22 335 IPR011009 -
Car03g01099 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Car03g01099 351 Gene3D Phosphorylase Kinase; domain 1 22 113 - -
Car03g01099 351 CDD STKc_IRAK 43 307 - -
Car03g01099 351 ProSiteProfiles Protein kinase domain profile. 37 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01099 Car-Chr3 52739389 52740444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01099 2 326 Receptor kinase-like Gene Family AT5G10530 57.447 5.01e-135 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car03g01099 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01099 - - gmx:100814713 543.117