Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01085 ATGGCTTCTCTCAAAAACCTTTTCTCTCTCTACATTCCCATGttcatcttcttcttcttcttcttcttcatcAAAGCCTCTACAAAATCTTTATCTCCTTCTACTTCCTCTGATGTTGAACTTCTCTTGATAAAAATCAAACCTTTACTTCAAGGCAACACTGAAAACCTTGTTTTATCATCATGGAACACTTCAACACCACTTTGTCAATGGAGAGGACTCAAATGGGTATTCACAAATGGTTCATCTCTTTCATGCAATGATTTGTCTTCACCACAATGGACCAATCTTTCACTTTTCAAAGACCCTTTTTTGCACTTGTTCTCTCTCCAGCTCCCTTCAGCAAATCTCTCTGGTTCTCTCCCTAGAGAGATTGGTCAGTTTCCTATGCTTCAAAGTCTTTACCTTAACATCAATTCATTGAGTGGAACCATTCCTCTTGAACTTGGCTATGCTTCTTCTCTTTTAGACATTGATTTGAGTCACAATGTTTTGACTGGTGATATTCCACCTTCTATTTGGAACTTGTGTGACAAACTTGTTTCTCTTAAGATTCATGGTAATTCATTATCAGGGTCTGTTTCAGAACCTGCATTGCCTAACTCATCTTGTAAATTTTTGCAGTTTCTTGATTTGGGTAGCAACAAATTTTCTGGTGATTTCCCTATTTTTGTTACAAATTTTGGTGGGTTAAAAGAGCTTGATTTAGGTGAGAACATGTTCACTGGTACAATTCCACAGGGTTTAACTGTTCTTAGGCTAGAAAAATTGAATCTTTCTCACAATAACTTTAGTGGGGTTTTGCCTTTGTTTGATGGATCAAAATTTGGTGTTGATGCTTTTGAAGGTAATAGTCCTGATTTGTGTGGTTCACCTTTGCCAAGTTGTGTTAAGAATTCTTCATCATTGAGTTCTGGTGCTGTTGCTGGTATTGTTATTAGTCTTATGACAGGTGCTGTTGTTTTGGCTTCATTGTTGATTGGTTATATGCAAaacaagaagaaaaaaggaagtggtgagagtgaagatgagttgaatgatgaattagaagaagatgaagaaAACggtggcggcggtggtggtggtgAAGGGAAGCTTATGTTATTCCCTGGTGGTGAGAATTTGACATTAGATGATGTGTTGAATGCGACCGGACAAGTTATGGAGAAGACATGTTATGGAACAGCTTATAAGGCAAAACTTGCTGATGGTGGAACAATTGCTTTGAGGTTGTTGAGGGAAGGTACTTGCAAGGATAGGAATTCGTGTTTGTCGGTTATAAAGCAGTTGGGGAAAATTAGACATGAGAATTTGATTCCTTTGAGAGCTTTTTATCAAGGGAAAAGAGGGGAGAAGTTGCTTATTTATGACTATTTGCCTCTCAGAACTCTTCATGATCTTTTGCATGAAATTAAAGCAGGAAAACCAGTGTTGAATTGGGCTAGGAGACACAAGATTGCATTAGGTATAGCAAGAGGACTAGCATATCTTCACACAGGACTCGACGTTCCCATCACTCATGCAAACGTAAGATCCAAGAACGTACTTGTCGATGACTTCTTCGTAGCCAGGCTCACCGATTTCGGCCTCGACAAACTAATGATCCCATCCATAGCCGACGAAATGGTGGCAGTTGCCAAGATCGACGGCTACAAGGCACCAGAGCTTCAAAGAATGAAGAAATGCAACTCTCGGACCGACGTTTATGCGTTCGGTATACTACTTTTGGAAATCTTGATCGGCAAGAAACCTGGCAAGAATGGAAGAAGCGGTGAGTACGTGGATTTACCATCGATAGTGAAAGTCGCGGTTTTGGAGGAGACGACGATGGAAGTGTTTGATGTGGAATTGTTGAAAGGGATAAGAAGTCCAATGGAAGATGGGTTAGTTCAAGCATTGAAGCTAGCAATGGGATGTTGTGCACCTGTTGCATCAGTTAGACCAAGTATGGATGAAGTTGTGAGACAATTGGAGGAGAATAGACCAAGGAATAGGTCTGCTTTATATAGTCCTACTGAGACAAGAAGTGGAAGTATTACTCCATTTTGA 2049 0.3758 MASLKNLFSLYIPMFIFFFFFFFIKASTKSLSPSTSSDVELLLIKIKPLLQGNTENLVLSSWNTSTPLCQWRGLKWVFTNGSSLSCNDLSSPQWTNLSLFKDPFLHLFSLQLPSANLSGSLPREIGQFPMLQSLYLNINSLSGTIPLELGYASSLLDIDLSHNVLTGDIPPSIWNLCDKLVSLKIHGNSLSGSVSEPALPNSSCKFLQFLDLGSNKFSGDFPIFVTNFGGLKELDLGENMFTGTIPQGLTVLRLEKLNLSHNNFSGVLPLFDGSKFGVDAFEGNSPDLCGSPLPSCVKNSSSLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKKKGSGESEDELNDELEEDEENGGGGGGGEGKLMLFPGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGGTIALRLLREGTCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEIKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHANVRSKNVLVDDFFVARLTDFGLDKLMIPSIADEMVAVAKIDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSIVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSITPF 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01085 682 SUPERFAMILY Protein kinase-like (PK-like) 391 658 IPR011009 -
Car03g01085 682 MobiDBLite consensus disorder prediction 662 682 - -
Car03g01085 682 Gene3D Phosphorylase Kinase; domain 1 371 458 - -
Car03g01085 682 ProSiteProfiles Protein kinase domain profile. 382 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01085 682 Gene3D Ribonuclease Inhibitor 201 298 IPR032675 -
Car03g01085 682 MobiDBLite consensus disorder prediction 343 357 - -
Car03g01085 682 SUPERFAMILY L domain-like 69 271 - -
Car03g01085 682 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 9 682 - -
Car03g01085 682 MobiDBLite consensus disorder prediction 335 363 - -
Car03g01085 682 Pfam Protein tyrosine and serine/threonine kinase 386 657 IPR001245 GO:0004672|GO:0006468
Car03g01085 682 Gene3D Transferase(Phosphotransferase) domain 1 460 674 - -
Car03g01085 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 9 682 - -
Car03g01085 682 MobiDBLite consensus disorder prediction 663 682 - -
Car03g01085 682 Gene3D Ribonuclease Inhibitor 39 200 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01085 Car-Chr3 52390648 52394011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01085 18 682 Receptor kinase-like Gene Family AT3G24660 74.925 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car03g01085 PK_Tyr_Ser-Thr 1.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01085 - - gmx:100814814 1085.86