Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01083 ATGTCTGGCCAGAGAAGCTCAAGAGATTCAAAGTTTTCAGAAAAACAGATTAATGAACTTGTGTCAAGGTTACAACTATTACTGCCTCAGTTGAATAACCAAAGAAACAACTCAATGCAATCAGCGTCCAAGATCTTGCAGGAAACTTTGAATCACATTAGGAGGCTTCAGAAAGAGGTGGAAGAAATCAGTGAGAAGCTAACACAATTAATGGATTCTGTTGATATCAATGACATTGACAGAAGAACTTTAGAGAACTTTTTGCAATATTAA 273 0.359 MSGQRSSRDSKFSEKQINELVSRLQLLLPQLNNQRNNSMQSASKILQETLNHIRRLQKEVEEISEKLTQLMDSVDINDIDRRTLENFLQY 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01083 90 Gene3D - 13 85 IPR036638 GO:0046983
Car03g01083 90 PANTHER DNA BINDING PROTEIN 1 89 - -
Car03g01083 90 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 73 IPR036638 GO:0046983
Car03g01083 90 Coils Coil 39 73 - -
Car03g01083 90 PANTHER DNA BINDING PROTEIN 1 89 IPR044172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01083 Car-Chr3 52366710 52368914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01083 2 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 47.297 1.01e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01083 - - gmx:100790746 88.5817