Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01078 ATGGCTGAAGAGGAACCAAAGGCTCTCAACTATGTTCCAGAGGTTATATTGAAGAAGAGGAAAAATAGTGAAGCATGGGCTTTAAGAAAAAAGGAGCAATTCCAGAAAAAAGGTTTCCAATTTAGGAAGTCCAAGGACTTTATTAAAAAGCCTGAGGATTTCATTTTTGAATATCGCAACAGGGAGGTGGACCTTCTTAGAATGAAACGCAGGCTCAAGGGCGTTAAGAGGAAACAGCCAGAACAATCGACCCCAAACAAGCCCATAATAGTCATTCGTATACAGGGGAAACAAGACATGCATCCTACAACCAGAAAGCACTTACTGAGTTTGGGATTGAGAAGAATATTCAGTGCTGTCTTAGTGAAGCCAACTGATGGAGTAATGGCCAAACTGCTGAGAGTGGAACCATATGTTACCTATGGATACCCAAATCTTAAAAGCATAAAGGAGCTAATTTACAAGAAGGGGAATGCGAAAATAGATAAGCGAAAAGTTCCTTTGACAGATAATAACATTATTGAGCAGGAATTAGGACAGTTCGGTATTGTATGCATAGAAGACATGGTGCATCAAATTGATAATGTTGGTCCACACTTTAAGGAAGTTGTCAGATTTATGTGGCCCTTTGAACTCAACAAGCCAGCAGAAGGATTGAAAGGATCGAAAACCCGATTCAAGGATGGTGGAGATGCAGGGAACCGTGAGGATCTCATCAACGAGCTCATCAATAAAATGAATTAA 744 0.4032 MAEEEPKALNYVPEVILKKRKNSEAWALRKKEQFQKKGFQFRKSKDFIKKPEDFIFEYRNREVDLLRMKRRLKGVKRKQPEQSTPNKPIIVIRIQGKQDMHPTTRKHLLSLGLRRIFSAVLVKPTDGVMAKLLRVEPYVTYGYPNLKSIKELIYKKGNAKIDKRKVPLTDNNIIEQELGQFGIVCIEDMVHQIDNVGPHFKEVVRFMWPFELNKPAEGLKGSKTRFKDGGDAGNREDLINELINKMN 247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car03g01078 247 Pfam Ribosomal protein L30p/L7e 90 139 IPR016082 -
Car03g01078 247 SUPERFAMILY Ribosomal protein L30p/L7e 90 247 IPR036919 -
Car03g01078 247 CDD Ribosomal_L7_archeal_euk 89 247 IPR035808 -
Car03g01078 247 Gene3D - 89 189 IPR036919 -
Car03g01078 247 Gene3D - 190 247 IPR036919 -
Car03g01078 247 Pfam Ribosomal L30 N-terminal domain 12 73 IPR012988 -
Car03g01078 247 PANTHER 60S RIBOSOMAL PROTEIN L7-1 3 247 - -
Car03g01078 247 PANTHER 60S RIBOSOMAL PROTEIN L7 3 247 IPR039699 -
Car03g01078 247 TIGRFAM uL30_euk: 60S ribosomal protein uL30 13 247 IPR005998 GO:0000463|GO:0003735|GO:0022625
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car03g01078 Car-Chr3 52230899 52235013 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01078 1 247 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 52.964 1.27e-84 251