Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01071 ATGATTAGGCATCCAAACATGATAGGTGATGTTGGTTTGGCAAGGCTTGTTCCTCCTTCTGTTCAAGACACTGTCACTCAGTACCACATGACATCAACTGCAGGAACTTTCTGTTACATTGATCCTGAGTACCAGCAAACTGGTATGCTTGGCATCAAACCTGATATTTACTCACTTGGAATCATGTTGGAAGATCTATTGAGAAGGGAACTTTTGCTGAGATGCTTGATCTTGCTGTTCAGGATTGGCCTATTGAAAACACCTTGCATTTCGCTAAAGTTGTGTTGCCTGAGCTCAACAAACTCAGAATATTTGCTGATGAAAATATGCCTATGA 336 0.4107 MIRHPNMIGDVGLARLVPPSVQDTVTQYHMTSTAGTFCYIDPEYQQTGMLGIKPDIYSLGIMLEDLLRRELLLRCLILLFRIGLLKTPCISLKLCCLSSTNSEYLLMKICL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01071 111 SUPERFAMILY Protein kinase-like (PK-like) 7 70 IPR011009 -
Car03g01071 111 Gene3D Transferase(Phosphotransferase) domain 1 5 78 - -
Car03g01071 111 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 66 - -
Car03g01071 111 PANTHER OS02G0152300 PROTEIN 7 66 - -
Car03g01071 111 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01071 Car-Chr3 52035047 52035382 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01071 8 67 Receptor kinase-like Gene Family AT5G35380 81.667 3.91e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car03g01071 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01071 - - cam:101511100 110.538