Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01063 ATGAGTTGCTTTTCATGTTTCTCCTCCAATGAAAAGAAAGTACCAAAGAGACataacaataataataacaataacaacaacaatGGAAAAAAGATACAACAGCCTCCAACTCAAATATCTCCTAAGAAAGCAGCTCAACCTCAACAAGAGAATAATCATTACAAGACAAGAGCTAGCCCACAACAAGACCCTAAAATAAATAATGAGACCAACAAAGATAATGGTAGCAACATTGCTGCACAAACTTTCACCTTCAGGGAATTGGCTTCTATCACAAGAAACTTTAGGCAAGAAAATCTAATAGGTGAAGGTGGATTTGGAAGAGTTTATAAGGGAAGGCTTGAAAAAACTAACCAAGAAGTAGCTGTGAAGCAACTTGACAGAAATGGATTGCAAGGTAACAGAGAGTTTCTTGTTGAAGTTTTGATGTTGAGCCTCTTGCACCATCAAAATTTAGTGAATTTAATTGGATATTGTGCTGATGGAGATCAAAGATTATTGGTATATGAGTATATGCCTTTGGGATCTCTAGAGGATCATTTGCTTGATCTACCTCCACAACAAAAACCATTAGATTGGTTCACAAAAATGAAAATAGCATTAGATGCTGCAAAAGGACTAGAATATTTACATGACAAAGCCAATCCACCTGTCATATATCGTGACTTAAAATCATCCAACATATTGTTGGACAAAGATTTCAATGCAAAACTCTCTGATTTTGGACTAGCAAAATTGGGACCCACAGGGGACAAGTCTCATGTTTCTTCAAGAGTAATGGGAACATATGGATACTGTGCACCTGAGTATCAAAGAACAGGTCAACTCACTGTGAAATCAGATATATACAGTTTTGGTGTTGTTTTACTTGAAATGATCACTGGAAGGAGAACCATTGATAACACAAGACCATCAAAGGAACAAAACCTTGTTTCTTGGGCAAATCCAATATTCAAGGACCCACAGAGATACTCAGAACTAGCAGATCCAAAGCTTGGAACAAATTTTCCAATGAGATCACTACATCAAGCAGTGGCAGTAGCAGCAATGTGTCTAAACGAAGAACCATCAGTGAGACCATTGATAAGTGATGTTGTAACAGCACTTAGTTTCCTTGGAGCATCACAAATGAATCAAGACCCACAAGTAATGTCACCCATTGACATGCCATCACCAACAACAAATGAAGAAGAAGAAGAAAGTGATAGTAATGCAATCTTGAGTCTTCTTGACGGTGATAGTGCATTGGATCGCCAAAAAGCAGTTGATGAAGCTATTCAATGGGGTTCAAATTCGAGAAATAATAATCCAACAAGGGCTGAAGAAAGTTCTAGTACCACTTTGTAA 1347 0.369 MSCFSCFSSNEKKVPKRHNNNNNNNNNNGKKIQQPPTQISPKKAAQPQQENNHYKTRASPQQDPKINNETNKDNGSNIAAQTFTFRELASITRNFRQENLIGEGGFGRVYKGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPPQQKPLDWFTKMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDKDFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSFGVVLLEMITGRRTIDNTRPSKEQNLVSWANPIFKDPQRYSELADPKLGTNFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGASQMNQDPQVMSPIDMPSPTTNEEEEESDSNAILSLLDGDSALDRQKAVDEAIQWGSNSRNNNPTRAEESSSTTL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01063 448 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 2 438 - -
Car03g01063 448 MobiDBLite consensus disorder prediction 1 77 - -
Car03g01063 448 SUPERFAMILY Protein kinase-like (PK-like) 81 397 IPR011009 -
Car03g01063 448 SMART serkin_6 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01063 448 Gene3D Phosphorylase Kinase; domain 1 65 171 - -
Car03g01063 448 MobiDBLite consensus disorder prediction 380 403 - -
Car03g01063 448 PANTHER OS07G0668900 PROTEIN 2 438 - -
Car03g01063 448 CDD STKc_IRAK 101 369 - -
Car03g01063 448 Gene3D Transferase(Phosphotransferase) domain 1 172 388 - -
Car03g01063 448 MobiDBLite consensus disorder prediction 426 448 - -
Car03g01063 448 MobiDBLite consensus disorder prediction 19 77 - -
Car03g01063 448 Pfam Protein kinase domain 96 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01063 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Car03g01063 448 ProSiteProfiles Protein kinase domain profile. 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01063 448 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01063 Car-Chr3 51905466 51908609 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01063 1 438 Glycoside Hydrolase AT3G07070 63.039 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car03g01063 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01063 - - gmx:100786405 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01063 03 51905466 51908609 Car03g01063 03 51905466 51908609 ECH