Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01047 ATGTCTCTTTCAAGAGCCACAGAGAGTAAACCAAACAACAACAACAACACTCAGATGAAGGAAAGTGGAGTTGCAACAACAGGAGCAGCACcttcttcctcttcttcttcATGGAATAGACTTCCTCCTATGCCTCCTCACACAACACATATGTTTGAAGATAGCGATGAAGATCTTTTCACAGTTCCGGATGTGGAAGCTACAACAGGTCAAAGTGTGCATTCTGAATTGACAAATCCTAATAGTAACCACAATCAAAGCAATGCAGCAGATCCTCAGCTTCAAACCGACTTCGCCGGAAAGCGTCGCCGTGGAAGAAACCCGGTGGATAAAGAGTATAGGCGACACAAAAGGTTACTAAGGAACAGAGTCTCTGCCCAACAAGCTCGTGAAAGAAAAAAGGTGTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGGAAGATAAGAACTCCAACTTAGATGAACGTATCTCAACTTTGATCAATGAGAACACTATGCTCCGGAAGGTTCTTATGAGTACTAGACCCAAAGTTGATGAGAGCAATGAATGTTAG 558 0.4122 MSLSRATESKPNNNNNTQMKESGVATTGAAPSSSSSSWNRLPPMPPHTTHMFEDSDEDLFTVPDVEATTGQSVHSELTNPNSNHNQSNAADPQLQTDFAGKRRRGRNPVDKEYRRHKRLLRNRVSAQQARERKKVYVNDLESRAKELEDKNSNLDERISTLINENTMLRKVLMSTRPKVDESNEC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01047 185 MobiDBLite consensus disorder prediction 65 94 - -
Car03g01047 185 MobiDBLite consensus disorder prediction 1 43 - -
Car03g01047 185 Gene3D Single helix bin 133 174 - -
Car03g01047 185 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 112 175 IPR004827 GO:0003700|GO:0006355
Car03g01047 185 Pfam bZIP transcription factor 111 170 IPR004827 GO:0003700|GO:0006355
Car03g01047 185 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 27 184 - -
Car03g01047 185 Coils Coil 130 164 - -
Car03g01047 185 MobiDBLite consensus disorder prediction 1 115 - -
Car03g01047 185 SMART brlzneu 110 174 IPR004827 GO:0003700|GO:0006355
Car03g01047 185 SUPERFAMILY Leucine zipper domain 113 172 IPR046347 GO:0003700|GO:0006355
Car03g01047 185 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 117 132 IPR004827 GO:0003700|GO:0006355
Car03g01047 185 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 27 184 IPR044280 GO:0000981|GO:0045944
Car03g01047 185 CDD bZIP_HY5-like 115 165 - -
Car03g01047 185 MobiDBLite consensus disorder prediction 97 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01047 Car-Chr3 51491109 51494190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01047 100 181 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 78.049 9.40e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g01047 bZIP_1 3.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01047 K16241 - gmx:778143 213.386