Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01046 ATGGATTTAAGAGAttcttggactgtcttctttctattttctagcttcttgcttgttgcttTCTGTGGACAAGAACATAGTTTCTTGAGTCTGTCATGTGGTGGAACAACCAGCTTCAATGATTCATCTAATATTTCATGGTTCCCAGACACACCTTACATAACCAGTGGAAAGACAACCACCATCAATTACAGCGACGGTTCCTCATCAACAAATGTCTCGGCTCGGTTCTTCCCCCGTTCCAGAGGCCGCGCATGCTATTGGATACCTGTGAACAATGCAACTAGTTTGATTCTTGTGAGAGCAACATTTGTGTACAAAAACTATGATGGACTTGGAAAACCACCTATTTTCTATGTTTCTCTTGGTACAGCTACTGCTGCTAAGATAAATCTGGCTAAAAATGATCCATGGACAGAAGAGTTTCTCTGGAAAATCAACAAGGATACACTGACGTTCTGTTTGAATTCAATTCCAAGTGGTGGCTCTCCTATAATTTCTTTACTTGAAATTAGACCACTTCCTAAAGGATCCTACACAAAGGGCAGAGAACATTTTCCGAATAAATTACTTAGGATGAGCTATAGAATTGATTGTGGACACATCAATGAGTCTATAAGGTACCCTATGGATCCATACGATAGAATATGGAATGGTGACAGAAGGTTCATACCTTCTCATGCTACAACTGAGTTTAAGATTCAGAATAACATAAATCAATCCAATATTGTGGAGGAACCACCAGCTTCAGTTCTTCAAAATGGAAGAGTCTTGCCGCGGCGAAAAATGCTTGCATATAACCTCCCTCTTGAAGGGTTAGGGGACTACTACATCATCCTCTATTTTGCTGGAATTCTTCATGTGTTCCCTTCATTTGATGTATTCATAAATGGAGATCTTGTAAAGTCAAACTATACAATAAAGAAAATCAGTGCTTTATATGTTACAAGAAAGGAGATCAGCAGCTTGAATATAACACTAAGAAGTATCAGCTTCTACCCTCAGATCAATGCATTTGAGGTATATAGTATGGTTGATATTCCACATGAAGCTTCCTCAACCACAGTTTCAGCAATGCAAGTTATTCAGCAGTCCACTGGCTTGGATCTTGGATGGCAAGATGATCCATGCTCCCCATTCCCATGGAATCACATAGATTGTGAAGGAAACTTAGTTACATCATTGGATCTCTCAGATATCAACTTGAGATCAATTAGTCCTACATTTGGTGACTTAATGGACCTTAAAACATTGGATTTGCACAACACATCACTTGCTGGTGAAATCCAGAATTTAGCTAGCTTGCAAAGTCTTCAAAAACTGAACCTCAGTTTCAATCAGCTGACATCCTTTGGTGTAGAGCTAGAGAACTTGATTAGCCTTCAAATTTTAGACTTGCAAAATAATAGTCTAGGAGGTGTAGTTCCTGATAGCTTGGGAGAGATAGAGGAACTCCACTTATTGAATCTAGAAAACAACAAACTACAAGGTCCACTCCCGCAGTCATTGAACAAAGACAATATAGATATCAGAATATCTGGGAATTCATGCCTTACTTTTTCTGCAACCTCATGTGATGATGTACCCTCCAATCCTACAATTGAGGCACCACAATTGATTATGATTCCCAAAAGGAAGCACCATGGAAAAAACCATCTAGCAATAATACTAGGCACAGTTGGAGGAGCTACACTTACAATTTTCCTGATATGTCTTTCAGCATTTGTATACAATGCTAAAATAAGATATGAAACCTTACACAAAACTAGGGAAGAAACCAATATGAGAAACTGGGGTGCAGAAAAAGTTTTTACCTACAAAGAAATCAAAGTAGCTACAAGCAATTTTAAGGAAATTATAGGAAGAGGAAGTTTTGGTTCTGTTTACCTAGGAAGGCTTCCAAACAGAAAAGCGGTTGCTGTCAAAGTTCGGTTTGATAAATCCCAACTTGGGGTTGATTCTTTTATCAATGAGATTCATCTGTTATCGAAAATCCGCCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAATCAAAGCATCAAATATTGGTTTATGAATACTTGGCTGGTGGATCCCTGGCTGATCACCTCTATGGTGCAAACAGCCATAAAACTCCCTTAAGATGGATTCGGAGGTTGAAAATCGCTATCGATGCAGCAAAAGGATTGGATTATTTACATAATGGAAGTGAACCAAGAATTATACACCGCGACATCAAGTGTAGTAACATACTCTTGGACATGGATTTGAATGCCAAGGTCTGTGACTTTGGCCTCTCTAAGCAAGTAACTCAGACAGATGCAACTCATGTCACCACTGTTGTCAAGGGAACTGCTGGCTATCTAGATCCAGAGTATTACTCTACCCAACAACTTACTGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAACCATTGATTCATTCTGGAACTCCTGATTCATTCAATTTGGTTTTATGGGCCAAACCCTATTTGCAGGCGGGCGCATTTGAAATTGTGGATGAAAGCATACAAGGAAATTTTGATCTAGAGAGTATGAAGAAGGCAGCATTCATAGCTATGAAGTCAGTGGAAAGAGATGTATCACAGAGACCACCTATTGCTGAAGTATTAGCGGAGCTAAAGGAGGCTTATGGTATTCAGCTCAGATTCCTTGAGTCTTATCAAAATGAGAGTTGA 2712 0.3838 MDLRDSWTVFFLFSSFLLVAFCGQEHSFLSLSCGGTTSFNDSSNISWFPDTPYITSGKTTTINYSDGSSSTNVSARFFPRSRGRACYWIPVNNATSLILVRATFVYKNYDGLGKPPIFYVSLGTATAAKINLAKNDPWTEEFLWKINKDTLTFCLNSIPSGGSPIISLLEIRPLPKGSYTKGREHFPNKLLRMSYRIDCGHINESIRYPMDPYDRIWNGDRRFIPSHATTEFKIQNNINQSNIVEEPPASVLQNGRVLPRRKMLAYNLPLEGLGDYYIILYFAGILHVFPSFDVFINGDLVKSNYTIKKISALYVTRKEISSLNITLRSISFYPQINAFEVYSMVDIPHEASSTTVSAMQVIQQSTGLDLGWQDDPCSPFPWNHIDCEGNLVTSLDLSDINLRSISPTFGDLMDLKTLDLHNTSLAGEIQNLASLQSLQKLNLSFNQLTSFGVELENLISLQILDLQNNSLGGVVPDSLGEIEELHLLNLENNKLQGPLPQSLNKDNIDIRISGNSCLTFSATSCDDVPSNPTIEAPQLIMIPKRKHHGKNHLAIILGTVGGATLTIFLICLSAFVYNAKIRYETLHKTREETNMRNWGAEKVFTYKEIKVATSNFKEIIGRGSFGSVYLGRLPNRKAVAVKVRFDKSQLGVDSFINEIHLLSKIRHQNLVSLEGFCHESKHQILVYEYLAGGSLADHLYGANSHKTPLRWIRRLKIAIDAAKGLDYLHNGSEPRIIHRDIKCSNILLDMDLNAKVCDFGLSKQVTQTDATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLIHSGTPDSFNLVLWAKPYLQAGAFEIVDESIQGNFDLESMKKAAFIAMKSVERDVSQRPPIAEVLAELKEAYGIQLRFLESYQNES 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01046 903 CDD STKc_IRAK 620 887 - -
Car03g01046 903 SMART serkin_6 614 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01046 903 Pfam Leucine rich repeat 437 495 IPR001611 GO:0005515
Car03g01046 903 ProSiteProfiles Protein kinase domain profile. 614 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01046 903 SMART LRR_typ_2 435 457 IPR003591 -
Car03g01046 903 SMART LRR_typ_2 458 481 IPR003591 -
Car03g01046 903 Gene3D Ribonuclease Inhibitor 354 526 IPR032675 -
Car03g01046 903 Gene3D Transferase(Phosphotransferase) domain 1 690 895 - -
Car03g01046 903 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515
Car03g01046 903 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 898 - -
Car03g01046 903 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Car03g01046 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Car03g01046 903 SUPERFAMILY L domain-like 358 505 - -
Car03g01046 903 Pfam Malectin-like domain 31 344 IPR024788 -
Car03g01046 903 Pfam Protein tyrosine and serine/threonine kinase 616 882 IPR001245 GO:0004672|GO:0006468
Car03g01046 903 PANTHER OS07G0107800 PROTEIN-RELATED 12 898 - -
Car03g01046 903 Gene3D - 191 346 - -
Car03g01046 903 SUPERFAMILY Protein kinase-like (PK-like) 595 885 IPR011009 -
Car03g01046 903 Gene3D Phosphorylase Kinase; domain 1 586 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01046 Car-Chr3 51460400 51467889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01046 10 898 Receptor kinase-like Gene Family AT5G48740 61.279 0.0 1074
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Car03g01046 Malectin_like 1.1e-50 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01046 - - aprc:113850446 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01046 03 51460400 51467889 Car03g01046 03 51460400 51467889 ECH