Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01039 atgatgacgaGAGTAACTGGTAGTGGCAATACAGGAACCGTGGTATACAAAAAGGGAACTGCTCTCGATCAGTTTGCAGCTGTGAAAAATGTCAAGTTTATCCCCAATTACCTAGGACCAAGCAATTTGTCGCAATGTGCATTGGTGGAATTGGATTCTGCCAAGAAGGTCAAGGAAGTGAGAGCAGTGATTGTGCAGTATCCTTTCATGATGTATGGGATGCCACGACCCGTAAGAGCTCATCCTGCTGTAGCGGAAATGTTTGATGATCGGCCAGTAAAGCCTAAGAGAAAGATGAAGTGTTGTTGGTTGGAGAAAAATGACCCTGATTTTGAGGTGGCAAGGAAGCTGGAGAATCTGACACGTAAAGATGCTGCAGAAATACCATTCATGCACAAAGTGCATCTAAAAGAAGAAGAGAAGCTTGCAGCTCAGCAGGCAGAAACACTTAAAGTGCATTACAAAAAGTTTAAGTTGATAGAGGGCATTATGACTGACAGAACCACCCTTACTTTGGCGCAAAAGATCAAGCTTAGTTTTACCCTGCTGCTGCTGCTAAAGAAATTCCATTTATACATGTGGGCTCATTGTCATTCAATCATAGCAACACCATTGCTTGTGGCATTTGAGAGCAGTTATGGTAAGCTGACATTTCTTATGTCACAACCATCATGGATATTATTGACCACTATCACTTCACATCAAGATGAACTGTGGATGTGTAAAGCTTTAATGCCTGAAGATGAGGAAAATATGACTGATGAAGCAATATGGAAAACTCTTCCTCACTTCTGGATTTCGATAGCCATGGTTTTCTTTATTGCTGCCAGTGTTTGTCACCCAGATCCGAAAGGTGTACATATAGAGTACAATATGCTAAAAATTAGAAAGGTGTACATGCTGAATTTATACACGTTAGCTGCTTTTTCTCCCCATGTTTGCATATCCTAA 951 0.4069 MMTRVTGSGNTGTVVYKKGTALDQFAAVKNVKFIPNYLGPSNLSQCALVELDSAKKVKEVRAVIVQYPFMMYGMPRPVRAHPAVAEMFDDRPVKPKRKMKCCWLEKNDPDFEVARKLENLTRKDAAEIPFMHKVHLKEEEKLAAQQAETLKVHYKKFKLIEGIMTDRTTLTLAQKIKLSFTLLLLLKKFHLYMWAHCHSIIATPLLVAFESSYGKLTFLMSQPSWILLTTITSHQDELWMCKALMPEDEENMTDEAIWKTLPHFWISIAMVFFIAASVCHPDPKGVHIEYNMLKIRKVYMLNLYTLAAFSPHVCIS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01039 316 Pfam Transmembrane Fragile-X-F protein 190 278 IPR019396 -
Car03g01039 316 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 20 178 - -
Car03g01039 316 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 20 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01039 Car-Chr3 51225214 51229552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01039 194 278 C3H Transcription Factor Family AT1G73950 44.792 4.20e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01039 - - cam:101507716 274.633