Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01033 ATGTGTTTCAGCAGCTGTGCGAATTTGCTCTCTGGTTTGTTCATTCTGTTTTATTATATGTTACACGTTAGTATTGCCATAAACACCATTACACCATCTCAATTCATCAAGGACCCTGAAACTCTACTCTCCAAAGACGGTTACTATTCCTTGGGATTCTTTAGCCCTGAAAATTCTACAAATCGCTATGTCGGAATTTGGTGGAAGTCTCAATCCACAAACATATGGGTGGCTAACAGAAACCATCCATTGAATGATTCTGATGGGATTGTCACAATATCTGAAGATGGCAATCTTGTGGTATTAAATGGACAAAAACAAGTCATATGGTCATCAAATGTATCCAACATAGCATCCAATACCACTTCCCAGTTTTTTGACTTCGGTAACCTTGTCCTTTTGGACAGCACAAGTGGAAACATCTTATGGCAGAGTATTCAGCAACCTTCAGATACATTACTGCCTGGTATGAAACTTTCTATCAACAAAAGAACAGGTGAGAAAGTAAAACTAAAATCATGGAAAAGCCCTTCTGATCCATCTGTTGGGAGTTTCTCTTCTAGTAGTGTTGAACGCCAAAATATACTGGAAGTGTTTATTTGGAATGAAACTCGACCATATTGGCGCAGTGGTCCCTGGAATGGTAGTGTCTTCACAGGGATAGATTATATGACAACTGCATATTTTTACGGTTTTAAAGGTGGAGATGGTGGAGATGGGAATATTAATGTATATTATACAATCCCAGATGATGTGGAATTCTTAATCTATAACCTGAATTCACAAGGAATATTAGAAGAAACAAGGTGGAATGATGAGCAGAAAGAAGTGCAAGTTACATGGACAAGCCGAGACTCAGAGTGTGATGTTTATGGTACATGTGGGGAATTTGCAAGCTGTAGTTCATTGATCTCACCAACATGCAGCTGTTTGAGAGGATTTGAACCTAGAAACATACGAGAATGGAATAGACACAACTGGACTGGTGGGTGTGTTAGGAGGACACCTTTGCAATGTGAAAGGGTCATCAATAAAACCACAAGGACAAAGGAAGATGGGTTTTTAAAATTGCAGATGGTTAAAGTTCCAGATTATGCAGAAGGTACAGCTGTTACACCAGACATATGCAGAAGCTTATGCTTAGAGAATTGCTCTTGCATTGCGTATTCTCATGATGCTGGGATTGGTTGTATGTCTTGGACTGGGAACTTACTTGATATAGAACAACTCGAAAGTGGAGGACTTGATCTATATGTTCGTGTAGCACATGCAGAACTCGATAATGGGAGAATCAAAACAATCATTATTACAATTATAGTGATAATTGGAACTCTCGTTATTGTCATTTGTGCATATATCATGTGGAGAAGGACTTCAAACAACCCAGCTAAACTGTGGCACTCTATCAAATCAACAAGGAAAATGAACAACAAAACCTTCGTAGTATTTAATAAAGGTGGAACATCAGAAGAAAATAATAGTGAAGATGTAATTGGAGGAATGTCCCAAGATAAACTACAGGATCTATTGCTATTTGATTTTGCAAAGCTTGCAACTGCCACAGATAACTTTCATTTGAACAACAAACTTGGACAGGGTGGTTTTGGTCCAGTATACAAGGGGAAACTGCAAGATGGTCAAGAAATAGCTGTTAAAAGACTTTCGAGATCATCTGGCCAAGGTTTAGAAGAATTCATGAATGAAGTAGTTGTGATTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGTTGTTGTATTGAAGGTGATGAAAAGATGTTGATGTATGAGTACATGCCAAATAAAAGTTTGGATGCATTTATCTTTGATCCATCAAGAAATAAACTTCTAGATTGGGAAAAACGCTTCAACATAATAGAAGGAATAGCTCGTGGATTACTTTATCTACATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATTTTGTTAGACGAGGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTCGGAGGGAGTGAAAATCATGCCAATACACAAAGGATTGTCGGAACATATGGTTATATGGCTCCAGAGTATGCAATGCAAGGAGTATTTTCAGATAAATCAGATGTTTTCAGCTTTGGAGTTCTGCTGATAGAGATTGTTAGTGGAAGACGAAACTCAAGCTTTTACGAAAGCGAAAATGCTCTTACACTCTTGGGATTCGCATGGAATCAATGGAGGGAAGACAATATTTCAACTTTAATAGAACCAGAAATATATGATCAAAGTCATCATAGGAATATTTTGAGATGCATACATATAGGACTTCTATGTGTACAAGAATCAGCTATAGATAGACCTACTATGGCTGTAGTAATTTCTATGCTTAACAGTGAAACCATGGACCTTCCTCCTGCAAGGGAACCTGCATTCCTCCTGAGACAGAATATGTTGAATACATTCTCTTCTGAAGAAATAGATGAATTGTGTTCCAATAATGCTGTGAGTATGACAGATCTTCACGGAAGATAG 2529 0.378 MCFSSCANLLSGLFILFYYMLHVSIAINTITPSQFIKDPETLLSKDGYYSLGFFSPENSTNRYVGIWWKSQSTNIWVANRNHPLNDSDGIVTISEDGNLVVLNGQKQVIWSSNVSNIASNTTSQFFDFGNLVLLDSTSGNILWQSIQQPSDTLLPGMKLSINKRTGEKVKLKSWKSPSDPSVGSFSSSSVERQNILEVFIWNETRPYWRSGPWNGSVFTGIDYMTTAYFYGFKGGDGGDGNINVYYTIPDDVEFLIYNLNSQGILEETRWNDEQKEVQVTWTSRDSECDVYGTCGEFASCSSLISPTCSCLRGFEPRNIREWNRHNWTGGCVRRTPLQCERVINKTTRTKEDGFLKLQMVKVPDYAEGTAVTPDICRSLCLENCSCIAYSHDAGIGCMSWTGNLLDIEQLESGGLDLYVRVAHAELDNGRIKTIIITIIVIIGTLVIVICAYIMWRRTSNNPAKLWHSIKSTRKMNNKTFVVFNKGGTSEENNSEDVIGGMSQDKLQDLLLFDFAKLATATDNFHLNNKLGQGGFGPVYKGKLQDGQEIAVKRLSRSSGQGLEEFMNEVVVICKLQHRNLVRLLGCCIEGDEKMLMYEYMPNKSLDAFIFDPSRNKLLDWEKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFGGSENHANTQRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVSGRRNSSFYESENALTLLGFAWNQWREDNISTLIEPEIYDQSHHRNILRCIHIGLLCVQESAIDRPTMAVVISMLNSETMDLPPAREPAFLLRQNMLNTFSSEEIDELCSNNAVSMTDLHGR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01033 842 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 840 - -
Car03g01033 842 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Car03g01033 842 Pfam Protein tyrosine and serine/threonine kinase 525 793 IPR001245 GO:0004672|GO:0006468
Car03g01033 842 CDD STKc_IRAK 530 796 - -
Car03g01033 842 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Car03g01033 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Car03g01033 842 Gene3D Phosphorylase Kinase; domain 1 500 599 - -
Car03g01033 842 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Car03g01033 842 Gene3D - 21 147 IPR036426 -
Car03g01033 842 SUPERFAMILY Protein kinase-like (PK-like) 512 824 IPR011009 -
Car03g01033 842 SMART blect_4 33 149 IPR001480 -
Car03g01033 842 SMART serkin_6 524 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01033 842 CDD B_lectin 33 145 IPR001480 -
Car03g01033 842 SMART ntp_6 349 421 IPR003609 -
Car03g01033 842 CDD PAN_AP_plant 335 422 - -
Car03g01033 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 840 - -
Car03g01033 842 Pfam Domain of unknown function (DUF3403) 797 842 IPR021820 GO:0004674
Car03g01033 842 PIRSF SRK 1 842 IPR024171 GO:0004674
Car03g01033 842 ProSiteProfiles Protein kinase domain profile. 524 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01033 842 Gene3D Transferase(Phosphotransferase) domain 1 600 803 - -
Car03g01033 842 Pfam D-mannose binding lectin 73 175 IPR001480 -
Car03g01033 842 Pfam PAN-like domain 349 407 IPR003609 -
Car03g01033 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01033 Car-Chr3 51070271 51086657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01033 491 810 Receptor kinase-like Gene Family AT4G23230 56.250 3.99e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car03g01033 PK_Tyr_Ser-Thr 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01033 - - cam:101513672 1359.74