Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01030 ATGTCAATCACCAATGGCTCTGTAATATTTAGTTTCAAATCAGATGTTTCCTCCTATTTCAAGTCAAGTATGAGCTTAGGTATTTCTTCAAGCTCAGGCTTTGGTTCAGCTACAAGCTCAGATGTAAGTGTTGCCACAGACACCATAACATCAACTAATTTTATCAAGGACTCTGAAACTCTAAGCTCCAAGAATGGTAACTTCACCTTAGGCTTCTTCAGCCCTGAAAATTCTACGAATCGCTATGTCGGAATTTGGTGGCAGCCACAATTCACAGTCTTATGGGTTCTCAATAGAGAAAAACCACTCAATGATTCTTCTGGTGTTGTTACAATGTCTGATGATGGCCATGATCTTGTGATACTGAATGGAAAGAAAGAAGTGATTTGGTCATCATCCAATGCGCCGAGCATCGCAACCAAGTCAAGTTCCAAACTTTTAGATTCAGGGAACATTGTACTACTTGAAGACACAACACGTAGAACTATATGGGAGAGTTTTCAGCATCCTTCAAATACACAGTTACCAAACATGAAACttactaccaacaaaataacagGTGAGAAAGTAAAACTTACATCATGGAAAAGCTCTTCTAATCCATCCATTGGAAGCTTCTCTTTAAGTGTTGAACGACTTAGTATAACTGAGGTGTTCATTTGGAACAAAACTCGACCATATTGGCGCACCGGTCCATGGGATGGTAAGATTTTTTCAAGGCTTCCATATACGAAAACTCATGACCTCAATGATATACATGTTGGAAATGACGGTTCCTTTTTTGAAACAACAAAGGATACAATTGGTCTCATAATCTATAATCTGACTTCAGAAGGAAACTGTGAAGAGAAATGGTGGGATGAAAAGAAGAAAGAATGGAATGTAACATGGAATAGTCATCAAATGGAATGTGATGTTTATGGTATGGTCAAAGTTCCTGATTTTGCAGATGGGTCTTCTCTCACACTTTCACCAGACACATGCAGAAGCCAATGTTTGGGGAATTGCTCTTGTGTTGCATATTCATATGATGCTGACATTGGTTGTATGTCTTGGACTGGGAATCTAGTTGACATACAACAATTCTCAAATGGAGGACTTGACTTGTATGTCCGTGTAGCCTACAAGAAATTGGAAGAAACCAATTTGAGAACACAATTGGAGAACTGTCACAAGTTAAACTCCAAGAGCTATTACTATTTAATTTTGGAAAGCTTGCAACTGCGACCAACAACTTCAATTCATCCAACAAATTTGGGCAGGGTGGTTTCGGACCAGTATACAAGGGGGCACTGTCTAATGGTCAGGAAATTGCGGTTAAAAAGACTTTCTACAGCATCTGGACAGGGTCTAAAAGAATTCATGAATAGTGATTCATCGGAAAGTAAAATCCTTGATTGGAGTAAACGCTTTAGCATAATAGAAAGAATAGCTCGGGGATTGCTTTATCTTCACAGAGATTCCAGGCTAAAAATTATACTTAGAGATTTGAAGCCAAGTAATATCTTGCTAGATAATGAGCTTAATCCAAAAATATCATACTTTGGTACGGCCAGAATCTTTGGAGGTAGTGAAGATCAAGAAAATACTAGAAGAGTCGTCGGAACTTATGACTATATGTCTCCAGAATACGCAATGCAAGGAATGTTTTCTGACAAATCTGATGTTTTTAGCTTCAGAGTTTTGCTTCTTGAGATTGTTAGTGGAAGACGAAATTCAAGCTTCTATGACTGCGAGGATTCTTTGACCCTTTTAGGATTTGCTTGGATACAATGGAGAGAAGACAATATTTCATCTTTTATAGATCCAAGAATATATGATCCTATTCATCATGAATGTATCTTTAGGTCCATACACATAGGGCTTCTGTGTGTACAGGAATTTTCCATAGACAGACCCACTATGTCTGTTGTAGTTTATATGCTTAATAGTGAGATTGTTGACCTTCCTCCACCAAAGAAACCTGCATTCATCTTGAGACAGAATATGCTGAGCACAGTGTCGTCTGAAGAAAGCAATGATGGCTTGTACTCTATCAACTTAGCCAGTATTTCAGATAGCCATGGCAGATAG 2073 0.3806 MSITNGSVIFSFKSDVSSYFKSSMSLGISSSSGFGSATSSDVSVATDTITSTNFIKDSETLSSKNGNFTLGFFSPENSTNRYVGIWWQPQFTVLWVLNREKPLNDSSGVVTMSDDGHDLVILNGKKEVIWSSSNAPSIATKSSSKLLDSGNIVLLEDTTRRTIWESFQHPSNTQLPNMKLTTNKITGEKVKLTSWKSSSNPSIGSFSLSVERLSITEVFIWNKTRPYWRTGPWDGKIFSRLPYTKTHDLNDIHVGNDGSFFETTKDTIGLIIYNLTSEGNCEEKWWDEKKKEWNVTWNSHQMECDVYGMVKVPDFADGSSLTLSPDTCRSQCLGNCSCVAYSYDADIGCMSWTGNLVDIQQFSNGGLDLYVRVAYKKLEETNLRTQLENCHKLNSKSYYYLILESLQLRPTTSIHPTNLGRVVSDQYTRGHCLMVRKLRLKRLSTASGQGLKEFMNSDSSESKILDWSKRFSIIERIARGLLYLHRDSRLKIILRDLKPSNILLDNELNPKISYFGTARIFGGSEDQENTRRVVGTYDYMSPEYAMQGMFSDKSDVFSFRVLLLEIVSGRRNSSFYDCEDSLTLLGFAWIQWREDNISSFIDPRIYDPIHHECIFRSIHIGLLCVQEFSIDRPTMSVVVYMLNSEIVDLPPPKKPAFILRQNMLSTVSSEESNDGLYSINLASISDSHGR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01030 690 Gene3D - 40 168 IPR036426 -
Car03g01030 690 SMART serkin_6 356 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01030 690 Pfam D-mannose binding lectin 92 196 IPR001480 -
Car03g01030 690 Gene3D Transferase(Phosphotransferase) domain 1 448 648 - -
Car03g01030 690 ProSiteProfiles Protein kinase domain profile. 341 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01030 690 CDD PAN_AP_plant 308 374 - -
Car03g01030 690 Pfam Protein kinase domain 461 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01030 690 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 309 382 - -
Car03g01030 690 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 41 309 - -
Car03g01030 690 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 201 IPR036426 -
Car03g01030 690 CDD B_lectin 52 170 IPR001480 -
Car03g01030 690 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 458 684 - -
Car03g01030 690 SUPERFAMILY Protein kinase-like (PK-like) 447 670 IPR011009 -
Car03g01030 690 Pfam S-locus glycoprotein domain 228 309 IPR000858 GO:0048544
Car03g01030 690 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 309 382 - -
Car03g01030 690 Pfam PAN-like domain 310 359 IPR003609 -
Car03g01030 690 ProSiteProfiles PAN/Apple domain profile. 304 374 IPR003609 -
Car03g01030 690 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 41 309 - -
Car03g01030 690 SMART blect_4 52 170 IPR001480 -
Car03g01030 690 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 458 684 - -
Car03g01030 690 SMART ntp_6 304 373 IPR003609 -
Car03g01030 690 ProSiteProfiles Bulb-type lectin domain profile. 46 167 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01030 Car-Chr3 51036177 51042085 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01030 458 686 Receptor kinase-like Gene Family AT4G23150 50.644 1.30e-67 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car03g01030 Pkinase 9.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01030 - - qsu:112013979 582.408