Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01023 ATGGTTAAAGTGCCTGATTTGGCAGAACTGTCATCAGATGAACAAGATGAATGCAGAAGGAAGTGTTTGGTGAATTGCTCTTGCACTGCATATTCATATAATTCTGATATTGGTTGTATATCTTGGAATGGAAATCTAATTGACATACAACAATTCGAAACTGGAGGAGCTGATCTATTCATTCGCGTAGCCTATGCTGAACTCGGCGTCTCAGATAAAGATAAAGGGCACAAAGGAACAGTCATTATTACAGTTTCAGTATTAATGGGAACTATTATAATTGCCATTGGTGCATATTTCATTTGTATAAAGGCTTCAAGTCCAGATCCGTCAAGAAATAAACTCCTAGATTGGGAAAAACGCTTCAACATAATAGAAGGAATAGCTCGTGGATTACTTTATCTACATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAAATCTTCGGAGGGAGTGAAAATCATGCCAATACACAGGATTGTCGGAACATATGGTTATATGGCTCCAGAGTATGCAATGCAAGGAGTGTTTTCAGATAAATCAGATGTTTTCAGCTTTGGAGTTTTGCTGATAGAGATTGTCAATGAAAGACGAAACTCAAGCTTTTACGAAAGCGAAAATGCTCTGACACTCTTAGGATTTGCATGGAATCAATGGAGGGAAGACAATATTTCAACTTTAATAGAATCAGAAATATATGATCAAAGTCATCATAGGAATATTTTGAGATGCATACATATAGGACTTCTATGTGTACAAGAATCAGCTATAGACAGACCTACTATGGCTGTAGTAATTTCTATGCTTAGCAGTGAAACCATGGACCTTCCTCCTGCAAGGGAACCTGCATTCCTCCTGAGACAGAATATGTTGAATACATTCTCTTCTGAAGAAATAGATGAATTGTGTTCCAATAATGCTGTGAGTATGACAGATCTTCATGGAAGATAA 963 0.3697 MVKVPDLAELSSDEQDECRRKCLVNCSCTAYSYNSDIGCISWNGNLIDIQQFETGGADLFIRVAYAELGVSDKDKGHKGTVIITVSVLMGTIIIAIGAYFICIKASSPDPSRNKLLDWEKRFNIIEGIARGLLYLHRDSRLKIIHRDLKAKSSEGVKIMPIHRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVNERRNSSFYESENALTLLGFAWNQWREDNISTLIESEIYDQSHHRNILRCIHIGLLCVQESAIDRPTMAVVISMLSSETMDLPPAREPAFLLRQNMLNTFSSEEIDELCSNNAVSMTDLHGR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01023 320 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01023 320 Pfam Domain of unknown function (DUF3403) 275 320 IPR021820 GO:0004674
Car03g01023 320 Gene3D Transferase(Phosphotransferase) domain 1 104 151 - -
Car03g01023 320 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 109 151 - -
Car03g01023 320 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 106 - -
Car03g01023 320 SMART tyrkin_6 46 273 IPR020635 GO:0004713|GO:0006468
Car03g01023 320 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 162 318 - -
Car03g01023 320 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 109 151 - -
Car03g01023 320 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 106 - -
Car03g01023 320 SMART ntp_6 1 63 IPR003609 -
Car03g01023 320 Pfam PAN-like domain 2 49 IPR003609 -
Car03g01023 320 Gene3D Transferase(Phosphotransferase) domain 1 152 283 - -
Car03g01023 320 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 162 318 - -
Car03g01023 320 ProSiteProfiles PAN/Apple domain profile. 1 64 IPR003609 -
Car03g01023 320 SUPERFAMILY Protein kinase-like (PK-like) 112 302 IPR011009 -
Car03g01023 320 CDD PAN_AP_plant 1 64 - -
Car03g01023 320 Pfam Protein kinase domain 114 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01023 Car-Chr3 50928566 50930441 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01023 109 320 Receptor kinase-like Gene Family AT4G23150 43.621 3.10e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car03g01023 Pkinase 8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01023 - - cam:101512173 358.221