Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01016 ATGGCGCATAACGACTCAAACTCCGATCCCAATCCCCAAGCCCGATTCTACAACCCATACAAAGACCTCGACATTCCTATTCAAAATCTCTACAAACTCTCAACCTCACCGGAGTTTCTCTTTGACGAAGAAGCTCGTCGTAAACGCAGTTCATGGGGAGAAAATCTCACATTCTACATCGGTTGCGGTTACCTCAGGGGTTCAATCGCTGGTGTCGAACTCGTCGACGACGTTAAAGCCTTCGAGTCCAGCGACACCACGAAGCTTCAGATGACTACCTCATGTGTTAATCTTAGTAATTCAGATTTAGTTTCAAGAGATAAGCTAATGGATCTTGAAGAGCATTCTAGAACAGAGCAAAGTGACTTTGAATTGCTCAAGAAGGCTCTTACCATTGATAACCAGAAAGATAACAAACAAATGACAAATGATTCAGAGGAAACAAAGTTGATGACTAGAAACAAATGGTCTGCTATAGTATATAGGCGAGCTGTTACGAATGATGGTGAATTTATTGCTGTCAAGAAGCTGAAGTCGCGCGGAGGAGCATCGAGCATCGACTGA 564 0.4344 MAHNDSNSDPNPQARFYNPYKDLDIPIQNLYKLSTSPEFLFDEEARRKRSSWGENLTFYIGCGYLRGSIAGVELVDDVKAFESSDTTKLQMTTSCVNLSNSDLVSRDKLMDLEEHSRTEQSDFELLKKALTIDNQKDNKQMTNDSEETKLMTRNKWSAIVYRRAVTNDGEFIAVKKLKSRGGASSID 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01016 187 PANTHER TIM23 3 92 IPR045238 GO:0022857
Car03g01016 187 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 3 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01016 Car-Chr3 50772446 50774345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01016 2 91 Chloroplast and Mitochondria Gene Families AT1G72750 56.842 1.96e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01016 K17794 - gmx:100813158 126.716