Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01006 ATGGGAAGGAATATTGAACTAATTGAAAAAGTTGTGATTGTTCCTGAGAAACCAACACCATGTAAGAGAATGTTCTTGTCAAATATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCTTCTTTCTTTGATCCACCAAGCAACCAAATGCAATTCTCTGAGATTTGTAACAAGTTATATAGTGCACTTGGTAAAATGCTTGTGCATTATGACTTTATGGCAGGCCGGCTTGTGCCGAGTTTCGAAGAGAAAAATCGATTTGAAATCGATTGTAATGATGCTGGTATTGTTGTTGCTGCTGCAAAAACTGATAGAAGGTTGTGTGAATTTGGTGTTATTTCAGCACCTAATCCGGAGTTAAGAGAATTGGTTGTTTTCTTGCATGAAGAAACTGATTTGAAAGAAACTCCCCTTGTTTCTTTACAGCTGACACAATTTGGATGTGGAAGTTTGGCACTTTCTTCTCATTACAACCACTGCATACTAGATGGTATAGCAGTAAGAGAATTTGAGGCAAATTTGGCGTCTCTAACACGCGGTGACGACATGATCATAATACCAAATGCAGATAGAACACTGCTAAAAGCAAGAAACTCACCAAAGATAACTCATCCACATTTTGAATACTCAAAATCTGCAAACATAGAAAATTTATTCACAATGCGTGGTACAAGTGGCACCAATGTTAAAAAAGACCTTACAGAAAATCAAACACACGTTCTTTATTTATCACAACAAAAAATTGCAAGCTACAAAAAGAAAGCACTGGAGAACACAGCTTTAAAAAACATCACAACTTTTCAAGTTGTAGCTGCAAAGATATGGAAAGCAAGAGCCTTAGCAACAAAGATGTCACATGAAAAAGTATCAACAATGTTGTTCCCTGTTGATGTCAGGAAAAGGGTTGTTCCTGAACTTCCAAATAGTTTTGCAGGGAATGCATTAGTCCCTGGATTTGCAAGAGCAACAGTGAAGGAACTAATGGAACTAGAAGATGATTTTCACATAAGAAAAGTGCAAGAAGGAATTGAAagattagatgatgagtatattaaatcaggtatagattggttagaattgaatagaGGTGTGCCTTGTAAGGAAGATAGTTTTTCATTGGTTGCATGGTGGAGATTGGGATTAGAGAATGAAGTTTTTGCTTGGGGGAGATTGAAATGTGCTACTCCACTTATAGTTAAGCCTGGTTTGGTTATGTTGTTGCCAGGGGCTAATGATGAAGGGGGTCTTAATATATGCTTGAGTTTACCTCAGGATCAATTGCAAGAGTTTTGTAGGATAATGTTAGAATGTTAA 1314 0.36 MGRNIELIEKVVIVPEKPTPCKRMFLSNIDLSLVVYQDSASFFDPPSNQMQFSEICNKLYSALGKMLVHYDFMAGRLVPSFEEKNRFEIDCNDAGIVVAAAKTDRRLCEFGVISAPNPELRELVVFLHEETDLKETPLVSLQLTQFGCGSLALSSHYNHCILDGIAVREFEANLASLTRGDDMIIIPNADRTLLKARNSPKITHPHFEYSKSANIENLFTMRGTSGTNVKKDLTENQTHVLYLSQQKIASYKKKALENTALKNITTFQVVAAKIWKARALATKMSHEKVSTMLFPVDVRKRVVPELPNSFAGNALVPGFARATVKELMELEDDFHIRKVQEGIERLDDEYIKSGIDWLELNRGVPCKEDSFSLVAWWRLGLENEVFAWGRLKCATPLIVKPGLVMLLPGANDEGGLNICLSLPQDQLQEFCRIMLEC 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01006 437 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 436 - -
Car03g01006 437 Pfam Transferase family 4 430 - -
Car03g01006 437 Gene3D - 222 434 IPR023213 -
Car03g01006 437 Gene3D - 3 211 IPR023213 -
Car03g01006 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01006 Car-Chr3 50568798 50570738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01006 5 436 Monolignol Biosynthesis Gene Families AT5G48930 26.174 7.51e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01006 K15400 - gmx:100801822 697.197