Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00979 ATGACCTCAATTATCATAGCATCTGCTTCTAGATCTAAAGATAAACTTAAGAGGAATGGGAAGAATCTTAAATGTGCACTTTCCTCGATCATGACAATAGTGTTGAGAAATGATTCATTTCAAATTGAGGAAACTACTTTTCAAATGCTTTCTTCAAGAGTTGACCATCCTTTGTATAAGTTAAGTGGTTTTCCTAAAGGTTTAAGAAAGAATGATCACATTAACAATGAAGACCTATCATTTGAAAAAAGTATCAAGTTACCATACATCGAAAGGGTACCCCCATATACATTTTGGTTACATTTGGTCAGAAATGAGAGAATGACCAAAGATCAATCATTTGCGGCAAGAAGAAACATATACTATGAACAACGTGGAGGTGAAGCACTTGTATGTAGTGACACCGATGAAGAGTTAAAAGAGAATAGAGAAGTTAAACACGACTTTTCTCATGGTGAAGACCAAATTATATGGATGGCATTTGAGGAACACAATTTGACAAAGGAGGTGCTAAGTATTGTTCAAAGCTATATTGGGGGTACCAATTCAGAGATTGAGGAGAGATACAAATATCTCAAGGAAAAGGACCAACATTCTAAAGAAAGTATAGAAGATGGATATATTAATATTGACATATGTTTGGAAAAAAGTTTGAGTGCTGCTTTAAATACTTTTGATCATCTTTTATGTCGTCGTTGCTTGATTTTTGATTGTCCTTTGCACGGATGTTCTCAACCGTTAGTTTATCCCAGTGAAAAACAACAAATTTGGAATGAGCCAGAAGGTGACAGGAAACCATGCAGTGATCATTGTTACCTTCAGAAAGAAACATGCAATTATGGGACAAAACCTAGTACAGCAGAAGTTAATTGTCTTTTAGATCTGAATTTAGATGTTGATGTATCAGAAAGTGAGGGAAAAGAAAAGGAAGTCCCATATGAAATTGAAACGAAGCAATTATCCAACTCAATGGAAAAGCTATTTAATGATATGCATAGTAACTCAAATTGGAAACCTTTGGAGAAAGATTTATATTTAAAGGGAATAGAAATGTTTGGGAGAAACAGTTGCCTTATATTTCGGAACTTACTTTCTGGCTTCAAGACTTGCATGGAAATAGCTAGCTACATGTATGCTGAAGGGTCAATGCCCTATGGATCCATGGACGAAAATGGAAAGTTTGATACAAAGGGCACTGACCATGAGATGCCATCAAATTCAAGGTCATTTAGGAGAAAAGGAAAAAGTAAGAAATTAAAATATTGTACAAAGTCACCAGGCCTGCCATCAATGTGGAGAAGAATTAGTGAAGGGAAAGATGAACCCTATAAGCATTATACACCATGTGGATGTGAAGGAATGTGTGGGAAACAATGTCCTTGTCTTCTTAAAGGATCTTGCTGTGAAAAGTATTGTGGGTGTGGCAAGCAATGCAGAAATCGGTTTAGAGGATGTCACTGTGTTAAAAGTCAATGTAGAAGTCGTCAATGTCCATGTTTTGCAGCAGCACGAGAATGTGACCCTGATGTTTGTCGAAGTTGTTGGATTAGTTGTGGCGATGGTTCATTAGGGGAGCCACCTCATCGTGGAGATGGTCTATGTGAAAATATGAAGCTTCTTCTAAGGAAAAAACAGAGGATTCTTTTGGCAAAGTCCAATGTTGCTGGATGGGGAGCCTTCTTAAAGAACCCTGCCAACAAAAATGATTTTCTAGGCGAGTACACAGGTGAAGTAATCTCTTATACAGAAGCAGAGAAACGTAGTAAATTATATGAACGTGCAGACTTCTCTTTCCTTTTTGACTTGGATGACCAGGCAAGTTGTGTTCTTGATGCATATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCATCAAAACCCAACTGTTATGCAAGGATTATGCATGTTGGTGGAGACTATAGAGTAGGGATATTTGCGAAGGAACGCATTGAAGCTGGTGAGGAACTTTTCTATGATTACCACTTTAAGGATAATCATAGACCACCTGCATGGTTTCTTAAACTTTCATCCaataataataataataataataataataCTTCCAAGAGAAAAGAATCTACAGATTCTCTTGGCAAGCCAAAGAAACGCGACTCTCGTTGA 2124 0.3691 MTSIIIASASRSKDKLKRNGKNLKCALSSIMTIVLRNDSFQIEETTFQMLSSRVDHPLYKLSGFPKGLRKNDHINNEDLSFEKSIKLPYIERVPPYTFWLHLVRNERMTKDQSFAARRNIYYEQRGGEALVCSDTDEELKENREVKHDFSHGEDQIIWMAFEEHNLTKEVLSIVQSYIGGTNSEIEERYKYLKEKDQHSKESIEDGYINIDICLEKSLSAALNTFDHLLCRRCLIFDCPLHGCSQPLVYPSEKQQIWNEPEGDRKPCSDHCYLQKETCNYGTKPSTAEVNCLLDLNLDVDVSESEGKEKEVPYEIETKQLSNSMEKLFNDMHSNSNWKPLEKDLYLKGIEMFGRNSCLIFRNLLSGFKTCMEIASYMYAEGSMPYGSMDENGKFDTKGTDHEMPSNSRSFRRKGKSKKLKYCTKSPGLPSMWRRISEGKDEPYKHYTPCGCEGMCGKQCPCLLKGSCCEKYCGCGKQCRNRFRGCHCVKSQCRSRQCPCFAAARECDPDVCRSCWISCGDGSLGEPPHRGDGLCENMKLLLRKKQRILLAKSNVAGWGAFLKNPANKNDFLGEYTGEVISYTEAEKRSKLYERADFSFLFDLDDQASCVLDAYRKGDKLKFANHSSKPNCYARIMHVGGDYRVGIFAKERIEAGEELFYDYHFKDNHRPPAWFLKLSSNNNNNNNNNTSKRKESTDSLGKPKKRDSR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00979 707 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 12 283 IPR045318 GO:0006338|GO:0018024
Car03g00979 707 SMART CXC_2 480 517 IPR033467 -
Car03g00979 707 Pfam CXC domain 484 515 IPR041355 -
Car03g00979 707 SUPERFAMILY SET domain 442 663 IPR046341 -
Car03g00979 707 MobiDBLite consensus disorder prediction 674 692 - -
Car03g00979 707 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 283 - -
Car03g00979 707 MobiDBLite consensus disorder prediction 693 707 - -
Car03g00979 707 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 321 685 - -
Car03g00979 707 ProSiteProfiles CXC domain profile. 432 531 IPR026489 -
Car03g00979 707 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 321 685 IPR045318 GO:0006338|GO:0018024
Car03g00979 707 SMART set_7 545 668 IPR001214 GO:0005515
Car03g00979 707 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 48 702 IPR025778 GO:0031519
Car03g00979 707 Gene3D SET domain 446 664 IPR046341 -
Car03g00979 707 CDD SET_EZH 545 661 - -
Car03g00979 707 Pfam SET domain 556 661 IPR001214 GO:0005515
Car03g00979 707 MobiDBLite consensus disorder prediction 674 707 - -
Car03g00979 707 ProSiteProfiles SET domain profile. 545 662 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00979 Car-Chr3 49975985 49988346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00979 534 661 C2H2 Transcription Factor Family AT2G23740 27.972 1.37e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car03g00979 SET 4.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00979 - K11430 cam:101511861 1404.81