Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00978 ATGGCCAATATGTTATTGGTCTTGCTTCACATTTTTCTGACCTTTGTCTTAACACAGTCAGCACCTCAAGATTCTCTTGTAACCAATCTTCCAGGCTTTAATGGCTCTCTAAATTCCAACCACTATGCTGGGTATGTGACAGTGGATGAAAGTCATGGTAGAAACTTGTATTACTATTTTGTTGAATCAGAAAGTAATCCATCAAAGGACCCTGTTGTTCTATGGCTTAATGGTGGACCAGGATGCTCTAGTCTTGATGGCTTTGTATTTGAGCATGGTCCTTTTAATTTTGAAAAACCTGCCACAAAGGGAGCATTGCCTAACTTGCAACTCAATCCATACAGCTGGTCAAAGGTTTCCAACATTATATATTTGGACTCTCCTGCTGGGGTTGGATTTTCATATTCAAAGAATGTATCTGATTATAAAACTGGAGATATTCAAACTGCTTATGATTCACACAATTTTCTCCTCAAATGGTTTGAATTATACCCTGAGTTTCAAGCAAACCCATTATTCCTTTCTGGAGAGTCTTATGCAGGAGTTTATGTGCCTACTCTTGCTAATCAAATAGTGATAGGAATTGAAAATGGAACCAAGCCAACATTGAATTTCAAGGGTTATATGGTTGGAAATCCTGTTACAGATGATTTGATTGATGGAAATGCTCTTGTTCCATTTGCACATGGGATGAGTCTTATTTCTAATGAACTTTTTGAGAACACAACAAAAGTATGCAAAGGAAACTTCTATGAAGTAGACACCGACGAGTGCGAGCTTTTGTTGGAAAAAGTCGACAAGGAAGTTGCAGATTTAAATGTGTATGACATTCTAGAACCATGTTATCATCCGGGAAAGACAAAGGAGAATAAAAATACAAATTCTAAGTTGCCATTAAGCTTTAGGGAATTGGGTAAGACTGATAAATCTTTACCTGTGAGGAAAAGAATGTTTGGTCGTGCTTGGCCCTACAAAGGTAATGTAAAAGATGGAATTGTGCCATCTTGGCCAGAACTCACGAGCACTAGTATATTGGTTCCTTGCACTGACGATGGGGTTGCTAACTCATGGCTGAACAATCCTGATGTCAGGAAAGCTATTCACACTGTGGAGGAAAGTGTGGTTGGTGCGTGGTACTTATGTACAGATCAAATTAAATACACTCATGATACAGGGAGTATGCTCAATTTTCACAAGAATCTTACTTCCAAAGGATATCGAGTATTAGCATATAGTGGTGATCATGACATGTGTGTCCCATATACTGGAACCGAAACATGGACAAAATTAGTTGGAGTTAAGATTGTTGATGAATGGAGGCCATGGTTCAGTAATGATCAAGTTGCTGGGTATACTCAAGGATATTCCAACAATCTCACATATCTGACAATAAAGGGATCAGGACACACTGTTCCAGAATATAAGCCACGAGAGTCATTGGATTTTTACAAACGTTTTCTTGATGGAGTGCCTATATAA 1479 0.384 MANMLLVLLHIFLTFVLTQSAPQDSLVTNLPGFNGSLNSNHYAGYVTVDESHGRNLYYYFVESESNPSKDPVVLWLNGGPGCSSLDGFVFEHGPFNFEKPATKGALPNLQLNPYSWSKVSNIIYLDSPAGVGFSYSKNVSDYKTGDIQTAYDSHNFLLKWFELYPEFQANPLFLSGESYAGVYVPTLANQIVIGIENGTKPTLNFKGYMVGNPVTDDLIDGNALVPFAHGMSLISNELFENTTKVCKGNFYEVDTDECELLLEKVDKEVADLNVYDILEPCYHPGKTKENKNTNSKLPLSFRELGKTDKSLPVRKRMFGRAWPYKGNVKDGIVPSWPELTSTSILVPCTDDGVANSWLNNPDVRKAIHTVEESVVGAWYLCTDQIKYTHDTGSMLNFHKNLTSKGYRVLAYSGDHDMCVPYTGTETWTKLVGVKIVDEWRPWFSNDQVAGYTQGYSNNLTYLTIKGSGHTVPEYKPRESLDFYKRFLDGVPI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00978 492 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Car03g00978 492 SUPERFAMILY alpha/beta-Hydrolases 27 491 IPR029058 -
Car03g00978 492 Gene3D alpha/beta hydrolase 19 330 IPR029058 -
Car03g00978 492 Pfam Serine carboxypeptidase 31 489 IPR001563 GO:0004185|GO:0006508
Car03g00978 492 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 13 489 - -
Car03g00978 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Car03g00978 492 Gene3D - 345 491 - -
Car03g00978 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 489 IPR001563 GO:0004185|GO:0006508
Car03g00978 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Car03g00978 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Car03g00978 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Car03g00978 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00978 Car-Chr3 49948965 49954092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00978 352 492 Calmodulin-binding Proteins AT2G22960 45.390 1.60e-39 139