Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00975 ATGGCCATCGCTCAGACCATCCTCGCTCAGGACCTCACCGACGAGCTCGTCATCGTCGACAACAAACCCGACAAACTCCGCGGCGAGATGGTCGACCTTCAGCGCGCCGCTGCTTTCTCCCCCGCGTTAAGATCAACTCATCCGATGAATACTCCGTTACCGCCGGGCCGATCTTTGTATCGTTACTGCCGGCGCACGACAGATCGCGGCTCTCCGGATTCCCATCCATTCGGATTATCGGGTCGGGTACCAACTTGGACTCCTCTCGCATCAGTTTCCTCGTTGGTGATCACCTTGAAATCATCAGGAAACAGTATATGGGAGAGTTTCAACCATCCAACAAATGTAATATTACCAAACATGAAACTTACAAGCTACAAAAGAAGTAGTGAGAAAGTAAAACTTACATCATGGAAAACACCTTCTGATCTGTCCGTTGGAAACTTCTCTTTAAGCGTCGAACGCCTGACTATTTCGGAAGTTATCATTTGGAATGAGACTCGGCCGTATTGGCGAAGTGGTCCTTGGAATAATCAAATTTTTATAGGGATAGAAGACATGGGAACTCTTTACCTTAATGGTTTTCATTTTGAAAAAGATGGTACGAGAGGAACTGTTGATTTGTATTTCAGAGCAGACGAATTTGTATTTCAGAGCAGACGACTGTGGACTTGCTTGCAGTGTGAAAGTGCAAACAATGATACCAAGAGTGCACATGGTAATGAACCAGACGGTTTTTTGGAATTTCATACGGTTAAAGTGCCTGATTTTGCAGAATTGTCATCAGATGAACAAGATGAATGCAGAAGGAAGTGTTTGGTGAATTGCTCTTGCACTGCATATTCATATTATTCTGATATTGGTTGTATGTCTTGGAATGGAAATCTAATTGACATACAACAATTCGAAACTGGAGGAGCTGATCTATTCATTCGCGTAGCCTATCCTGAACTTGACGTCTCAGATAAAGGGCACAAAGGAACAGTCATCATTACAGTTTCAGTATTAATAGGAACTACTATAATTTCCATTGGTGCATATTTCATTTGTATAAAGGCTTCAAGTCCCGTGAGAAAAAAGAACACAATTTTTCAGTTCAACAAAATTGAAACACCTAAAGAATACACAAGTGACAATGTAATTGGAGAATTGTCACAAGCTAAGCTACAAGAGTTATTACTGTTTAATTTTGAGAAGCTTGCAATTGCCACAAATAACTTCCATTCATGTAACCAACTTGGTCAGGGAGGTTTTGGTCTGGTATACAAGGGAATACTGCAGGATGGTAAGGAAATAGCCGTTAAAAGACTTTCAAGATCATCGGGACAAGGACTAGAAGAATTCATAAATGAAGTAGTAGTGCTTTCTAAGCTTCAGCATCGCAATCTTGTACGCCTTTTAGGTTGTTGTATTGAAGGAGATGAAAAGATGTTGATGTATGAGTTCATGCCAAATAGAAGTTTGGATGCATATGTGTTTGATCCATCAAGAAATAAACTTCTAGATTGGGAAAAACGCTTCAACATAATAGAAGGAATAGCTCGTGGATTACTTTATCTACATAGAGATTCTAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATTTTGCTAGACGAGGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTCGGAGGGAGTGAAAATCATGCCAATACACAAAGGATTGTCGGAACATATGGTTATATGGCTCCAGAGTATGCAATGCAAGGAGTATTTTCAGATAAATCAGATGTTTTCAGCTTTGGAGTTCTGCTTATAGAGATTGTTAGTGGAAGACGAAACTCAAGCTTTTACGAAAGCGAAAATGCTCTTACACTCTTGGGATTCGCATGGAATCAATGGAGGGAAGACAATATTTCAACTTTAATAGAACCAGAAATATATGATCAAAGTCATCATAGGAATATTTTGAGATGCATACATATAGGACTTCTATGTGTACAAGAATCAGCAATAGATAGACCTACTATGGCTGTAGTAATTTCTATGCTTAACAGTGAAACCATGGACCTTCCTCCTGCAAGGGAACCTGCATTCCTCCTGAGGCAGAATATGTTCAATACAATCTCTTCTGAAGAAATAGATGAATTGTGTTCCAATAATGTTGTATGA 2154 0.3979 MAIAQTILAQDLTDELVIVDNKPDKLRGEMVDLQRAAAFSPALRSTHPMNTPLPPGRSLYRYCRRTTDRGSPDSHPFGLSGRVPTWTPLASVSSLVITLKSSGNSIWESFNHPTNVILPNMKLTSYKRSSEKVKLTSWKTPSDLSVGNFSLSVERLTISEVIIWNETRPYWRSGPWNNQIFIGIEDMGTLYLNGFHFEKDGTRGTVDLYFRADEFVFQSRRLWTCLQCESANNDTKSAHGNEPDGFLEFHTVKVPDFAELSSDEQDECRRKCLVNCSCTAYSYYSDIGCMSWNGNLIDIQQFETGGADLFIRVAYPELDVSDKGHKGTVIITVSVLIGTTIISIGAYFICIKASSPVRKKNTIFQFNKIETPKEYTSDNVIGELSQAKLQELLLFNFEKLAIATNNFHSCNQLGQGGFGLVYKGILQDGKEIAVKRLSRSSGQGLEEFINEVVVLSKLQHRNLVRLLGCCIEGDEKMLMYEFMPNRSLDAYVFDPSRNKLLDWEKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFGGSENHANTQRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVSGRRNSSFYESENALTLLGFAWNQWREDNISTLIEPEIYDQSHHRNILRCIHIGLLCVQESAIDRPTMAVVISMLNSETMDLPPAREPAFLLRQNMFNTISSEEIDELCSNNVV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00975 717 ProSiteProfiles Protein kinase domain profile. 407 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00975 717 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 91 211 - -
Car03g00975 717 CDD STKc_IRAK 413 679 - -
Car03g00975 717 CDD PAN_AP_plant 226 314 - -
Car03g00975 717 PIRSF SRK 212 717 IPR024171 GO:0004674
Car03g00975 717 PIRSF SRK 71 223 IPR024171 GO:0004674
Car03g00975 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Car03g00975 717 Pfam PAN-like domain 242 299 IPR003609 -
Car03g00975 717 SUPERFAMILY Protein kinase-like (PK-like) 394 705 IPR011009 -
Car03g00975 717 Gene3D Phosphorylase Kinase; domain 1 357 482 - -
Car03g00975 717 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 224 716 - -
Car03g00975 717 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 91 211 - -
Car03g00975 717 Pfam Protein tyrosine and serine/threonine kinase 410 676 IPR001245 GO:0004672|GO:0006468
Car03g00975 717 Gene3D - 1 51 - -
Car03g00975 717 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 177 IPR036426 -
Car03g00975 717 SMART ntp_6 241 313 IPR003609 -
Car03g00975 717 Gene3D Transferase(Phosphotransferase) domain 1 483 686 - -
Car03g00975 717 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Car03g00975 717 ProSiteProfiles PAN/Apple domain profile. 228 314 IPR003609 -
Car03g00975 717 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 224 716 - -
Car03g00975 717 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 45 IPR036291 -
Car03g00975 717 SMART serkin_6 407 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00975 717 Pfam D-mannose binding lectin 89 139 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00975 Car-Chr3 49907235 49911950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00975 321 717 Receptor kinase-like Gene Family AT4G21410 51.861 2.11e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car03g00975 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00975 - - cam:101512173 853.203