Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car03g00965 | ATGAACGAAGATTTTGATATTCCCCAAGCCGAAGAGTTCAACAACGATTTTGATCTCCCTGAAGACAAGGTAGGCGAGGAGAGAGAAATCGGCGATCGAGGTCTCAAGAAGAAGCTTCTCAAAGAAGGTGAAGGATGGGACACTCCTGAAATCGGAGACGAAGTTCAAGTTCACTATACTGGGACTTTGCTTGATGGAACTAAGTTTGATTCGAGTCGCGATAGAGATTCTCCTTTTAGCTTCACGCTTGGACAAGGGCAAGTAATTCAAGGATGGGATAAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCACTTTTCACCATCCCTCCCGAGCTAGCTTATGGTGAATCTGGTTCGCCTCCAACAATTCCTCCTAATGCGACACTCCAATTTGATGTTGAGCTGTTGTCTTGGACTAGTGTGAAGGACATTTGTAAGGATGGCGGTATATTTAAAAGGATACTTAGTGAGGGGGATAAATGGGAGAACCCTAAGGATCTCGATGAAGTATTGGTTAAATACGAGGTTTGTCTGGAGGACGGAAAGGTTGTAGCAAAGTCTGATGGAGTGGAGTTCACTGTCAGTGAAGGTCATTATTGTCCTGCATTGTCAAAGACTGTTAAAACCATGAAGAAGGGAGAGAAAGTGAATTTGTTAGTAAAGCCTCAGTATGGGTTTGGTGAGAAGGGGAAGCCAGCGGATAGCGACGAAGGTGCAGTTCCACCAAATGCAACACTGCAAATTACTCTTGAGTTGGTTTCTTGGAAGACTGTTTCAGATGTGACTAGTGACAAGAAGGTCATAAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCATCCAAATGAAGGGGCCATTGTAAAATTGAAACTAGTTGGTAAGCTGCAAGATAGTACTGTCTTTTTCGAGAAGGGCCGCGATGAAGAAGAGAAGCTGTTTGAATTCAAAACAGATGAGGAGCAAGTCATTGATGGACTTGATAAAGCTGTAATGACTATGAAGAAGGGTGAGGTAGCATTATTGACTATTGCTCCAGAATATGCATTTGGTTCATCAGAGTCTCAGCAGGAGTTGGCTGTTATTCCTCCTAATTCAACTGTCTATTATGAAGTTGAGCTAGTGTCATTTGACAAGGAGAAGGAATCTTGGGATATGAACACTCAAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGTTTTGTTTAAAGCCGGTAAATATGCAAGAGCTTCCAAAAGATATGAGAAGGCTGTAAAGTACATTGAGTATGATTCCTCCTTCAGCGAGGAGGAGAAAAAGGTATCAAAGACCTTGAAGCTTGCGTCCTATCTAAACAATGCTGCTTGCAATTTGAAGTTGAAAGAGTACAAAGATGCAGAGAAATTGTGTACTAAGGTGTTGGACATTGAGAGCACTAATGTGAAAGCCCTCTATAGAAGGGCTCAGGCAAGTATGCAGTTGGGTGACTTGGATTTGGCTGAAATTGACATTAAAAAAGCTCTTGAGGTTGACCCGGACAACAGGGAAGTAAAGCTGGAATATAGGACTTTGAAGGAAATGGTAAAGGAGTACAATAAAAAGCAGGCGAAATTTTATGGAAATATGTTCAAGTTGACAAAGGATTGA | 1638 | 0.417 | MNEDFDIPQAEEFNNDFDLPEDKVGEEREIGDRGLKKKLLKEGEGWDTPEIGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQGQVIQGWDKGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKRILSEGDKWENPKDLDEVLVKYEVCLEDGKVVAKSDGVEFTVSEGHYCPALSKTVKTMKKGEKVNLLVKPQYGFGEKGKPADSDEGAVPPNATLQITLELVSWKTVSDVTSDKKVIKKILKEGEGYEHPNEGAIVKLKLVGKLQDSTVFFEKGRDEEEKLFEFKTDEEQVIDGLDKAVMTMKKGEVALLTIAPEYAFGSSESQQELAVIPPNSTVYYEVELVSFDKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYARASKRYEKAVKYIEYDSSFSEEEKKVSKTLKLASYLNNAACNLKLKEYKDAEKLCTKVLDIESTNVKALYRRAQASMQLGDLDLAEIDIKKALEVDPDNREVKLEYRTLKEMVKEYNKKQAKFYGNMFKLTKD | 545 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car03g00965 | 545 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Car03g00965 | 545 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 285 | 378 | IPR001179 | GO:0003755 | |
| Car03g00965 | 545 | Pfam | Tetratricopeptide repeat | 478 | 511 | IPR001440 | GO:0005515 | |
| Car03g00965 | 545 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 279 | 375 | IPR001179 | GO:0003755 | |
| Car03g00965 | 545 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 163 | 254 | IPR001179 | GO:0003755 | |
| Car03g00965 | 545 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 48 | 137 | IPR001179 | GO:0003755 | |
| Car03g00965 | 545 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 168 | 257 | IPR001179 | GO:0003755 | |
| Car03g00965 | 545 | SUPERFAMILY | FKBP-like | 15 | 144 | - | - | |
| Car03g00965 | 545 | Gene3D | Tetratricopeptide repeat domain | 381 | 538 | IPR011990 | GO:0005515 | |
| Car03g00965 | 545 | MobiDBLite | consensus disorder prediction | 16 | 30 | - | - | |
| Car03g00965 | 545 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 266 | 377 | - | - | |
| Car03g00965 | 545 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 264 | - | - | |
| Car03g00965 | 545 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 378 | 542 | - | - | |
| Car03g00965 | 545 | SUPERFAMILY | FKBP-like | 144 | 260 | - | - | |
| Car03g00965 | 545 | ProSiteProfiles | TPR repeat profile. | 478 | 511 | IPR019734 | GO:0005515 | |
| Car03g00965 | 545 | SUPERFAMILY | TPR-like | 383 | 540 | IPR011990 | GO:0005515 | |
| Car03g00965 | 545 | SUPERFAMILY | FKBP-like | 260 | 395 | - | - | |
| Car03g00965 | 545 | Gene3D | - | 144 | 257 | IPR046357 | GO:0003755 | |
| Car03g00965 | 545 | Gene3D | - | 28 | 143 | IPR046357 | GO:0003755 | |
| Car03g00965 | 545 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 52 | 140 | IPR001179 | GO:0003755 | |
| Car03g00965 | 545 | SMART | tpr_5 | 395 | 428 | IPR019734 | GO:0005515 | |
| Car03g00965 | 545 | SMART | tpr_5 | 444 | 477 | IPR019734 | GO:0005515 | |
| Car03g00965 | 545 | SMART | tpr_5 | 478 | 511 | IPR019734 | GO:0005515 | |
| Car03g00965 | 545 | Coils | Coil | 511 | 531 | - | - | |
| Car03g00965 | 545 | Gene3D | - | 258 | 379 | IPR046357 | GO:0003755 | |
| Car03g00965 | 545 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 378 | 542 | - | - | |
| Car03g00965 | 545 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 264 | - | - | |
| Car03g00965 | 545 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 266 | 377 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car03g00965 | Car-Chr3 | 49804285 | 49813727 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car03g00965 | 23 | 540 | Calmodulin-binding Proteins | AT3G25230 | 79.730 | 0.0 | 843 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car03g00965 | K09571 | - | gmx:100812632 | 914.064 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car03g00965 | 03 | 49804285 | 49813727 | Car07g03233 | 07 | 59933646 | 59937450 | PCT |