Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00963 ATGGGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCCTGGAGAAAGAAGAGAAAGTACGAGCTTGGTCGTCAGCCAGCAAACACTAAATTATCAAGCAACAAGACAGTCAGGAGGATCCGTGTTCGAGGGGGTAATGTGAAGTGGAGAGCTCTTAGATTGGATACTGGTAACTTCTCATGGGGTAGTGAAGCAGTAACTCGCAAGACTCGTCTTCTGGATGTGGTTTACAATGCCTCAAATAACGAGCTTGTCCGAACACAGACTCTTGTTAAGGGTGCTATTGTCCAGGTGGATGCTGCACCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAAAAAGAAATCAGCTGCAGCCAAGAAGGATTCTGTAGAGGAGGTTGAAGCCGCCACTGAAGAAGCCAAGAAAAGTAATCATGTGCAGAGGAAACTTGAGAACCGTCAAAAAGATCGTCAGCTAGATTCCCACATTGAAGAGCAGTTTGGTGGTGGTCGTTTGCTGGCCTGTATTTCATCTCGTCCTGGTCAATGTGGCAGGGCTGATGGGTACATCCTTGAAGGTAAGGAACTGGAATTTTACATGAAGAAGTTACAGAGGAAGAAGGGAAAGGGTGCTGCTTAA 657 0.4658 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVEIGRKKKSAAAKKDSVEEVEAATEEAKKSNHVQRKLENRQKDRQLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00963 218 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car03g00963 218 MobiDBLite consensus disorder prediction 1 41 - -
Car03g00963 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Car03g00963 218 MobiDBLite consensus disorder prediction 11 26 - -
Car03g00963 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Car03g00963 218 Gene3D - 162 215 - -
Car03g00963 218 Gene3D - 32 161 - -
Car03g00963 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 - -
Car03g00963 218 CDD Ribosomal_S8e_like 5 197 - -
Car03g00963 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car03g00963 218 Coils Coil 139 159 - -
Car03g00963 218 MobiDBLite consensus disorder prediction 141 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00963 Car-Chr3 49773131 49775564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00963 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.951 2.01e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00963 K02995 - gmx:100500112 388.267