Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00954 ATGAGTTACAGCGGCGAAACATGGGACTTCCGAAACCTTAAGGTAATATCGGCCGTGGGACGCGGTGCAAAAGGCGTTGTGTTCCTTGCGAGAACCTACGGATCATCGAAAGAGGAATGGATGGCTTTGAAAGTTATATCTAAAGAACTTCTTCAGAAGAAAAATAAAAACCAAACAGGTCAATGCAAAAGGGTCACGTTTGAACAACAAATACTACGTCGTTTTGATCATCCTCTTTTGCCACGATTAAAAGGTGTTTTTGAAACTGAGAATCTTATTGGATTCGCCATTGATTATTGTCATGGTGGAAATTTGCATTCTCTTAGAAAGAAACAGCCTCAGAAGATATTCTCTGAAGAAATTATTAGGTTTTATGCTGTGGAATTGGTCTTAGCATTGGAGTACCTACACAATTTAGGAGTAGTTTATAGAGATTTGAAACCAGAGAACATCATGATTCAACAAACGGGTCATATAATGCTTGTAGATTTCGACCTATCCAAGAAACTTAACCCAAAATCACTGAGTTGCAACTCGTCACCAGGTTCCAACTCGCCAAATGTAACAACAGATAAGAAGAGATGGTTAGTGCGGTTTTATCATTCTTTTCATTGCCATTCTAGATTACCAAGTTTCGACTCGGAGAATCAACTCGATCCAAACTCGGTGTGTAAAAGGAGCGAGTCAGACTCGGTTGAGAAGTCAAACTCGTTCGTGGGAACCGAGGATTACGTGGCACCTGAGGTTATTTTAGGAAATGGACATAACTTTAGCGTTGATTGGTGGTCACTCGGTGTTGTTTTGTATGAGTTATTTTACGGAACGACGCCGTTTAGTAGTCCTAATAGAAAGGAAACGTTCCACCGGATTTTGACAAATGAGCCTGAACAAAATAGTGAAACAACGCCGTTGAAGGATTTGATCACGAAGTTACTTGAAAAAGATCCTGACCGTAGGATTCAGGTTGATGAAATAAAGGGTCATGATTTTTTCAAAGGTGTGGAGTGGAACACGGTGTTGCAAATAGCACGTCCACCGTATATTCCGCATAATGAAGTTGAGGATAAAAATGGGTTTTCAAGAAAAGATGTTGAGTCGTTTGTTCATGGAATATTTTTTCCAAAGAATAGTAATAATGGTGAATTAGAGAAAAATAAAGAGGAGGTGAGAAAAACTGATGGAAAAGAGAAGGAAGGTAATAGCAATGACAATGGTAAGAAGAATGTGTGGGTTGAGAAGTTAAGTCAGAATCAAACTAAGAATGACAattttttgattttttga 1284 0.3863 MSYSGETWDFRNLKVISAVGRGAKGVVFLARTYGSSKEEWMALKVISKELLQKKNKNQTGQCKRVTFEQQILRRFDHPLLPRLKGVFETENLIGFAIDYCHGGNLHSLRKKQPQKIFSEEIIRFYAVELVLALEYLHNLGVVYRDLKPENIMIQQTGHIMLVDFDLSKKLNPKSLSCNSSPGSNSPNVTTDKKRWLVRFYHSFHCHSRLPSFDSENQLDPNSVCKRSESDSVEKSNSFVGTEDYVAPEVILGNGHNFSVDWWSLGVVLYELFYGTTPFSSPNRKETFHRILTNEPEQNSETTPLKDLITKLLEKDPDRRIQVDEIKGHDFFKGVEWNTVLQIARPPYIPHNEVEDKNGFSRKDVESFVHGIFFPKNSNNGELEKNKEEVRKTDGKEKEGNSNDNGKKNVWVEKLSQNQTKNDNFLIF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00954 427 ProSiteProfiles AGC-kinase C-terminal domain profile. 332 427 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car03g00954 427 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 6 397 - -
Car03g00954 427 Pfam Protein kinase domain 15 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00954 427 Pfam Protein kinase domain 233 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00954 427 MobiDBLite consensus disorder prediction 378 427 - -
Car03g00954 427 SMART serkin_6 13 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00954 427 SUPERFAMILY Protein kinase-like (PK-like) 12 354 IPR011009 -
Car03g00954 427 MobiDBLite consensus disorder prediction 380 403 - -
Car03g00954 427 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Car03g00954 427 Gene3D Transferase(Phosphotransferase) domain 1 223 359 - -
Car03g00954 427 PANTHER FLIPPASE KINASE 1-RELATED 6 397 - -
Car03g00954 427 MobiDBLite consensus disorder prediction 404 427 - -
Car03g00954 427 ProSiteProfiles Protein kinase domain profile. 13 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00954 427 Gene3D Transferase(Phosphotransferase) domain 1 104 191 - -
Car03g00954 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00954 Car-Chr3 49474669 49476680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00954 7 380 AGC Kinase Gene Family AT4G13000 56.000 1.71e-137 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car03g00954 Pkinase 5.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00954 K20714 - gmx:100813693 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00954 03 49474669 49476680 Car07g03250 07 60115860 60117524 PCT