Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00950 ATGAAGTTCAATGTTGCGAATCCCACTACTGGATGCCAGAAAAAGCTCGAGATCGACGATGATCTGAAACTACGAGCATTTTGGGACAAGAGGATTTCACAAGAGGTCAATGGTGATGCTCTTGGTGAGGAATTTAAGGGCTATGTCTTCAAAATTACTGGTGGGTGTGACAAGCAAGGATTTCCAATGAAGCAAGGAGTGCTGACCCCTGGCCGTGTTCGTCTTTTGCTTCACAGGGGAACTCCTTGCTTTCGTGGATATGGAAGGCGCAATGGAGAACGCAGGAGGAAGTCTGTTCGTGGATGCATTGTCAGCCCAGACCTCTCTGTCCTGAACTTGGTTATTGTTAAGAAGGGTGAGAATGATTTACCAGGCCTGACCGATGTTGAGAAGCCAAGGATGAGAGGGCCTAAGAGAGCATCCAAAATTCGTAAGCTGTTCAACCTGTCTAAGGAGGATGATGTGAGGAAAAAGCGAGCAAGGATCGCTGATAAGAAGAAGAGAATTGCTAAGGCAAAATCAGAGGCAGCTGAGTACCAGAAGCTACTTGCCTCTAGGTTGAAGGAGCAGAGGGAGCGTCGTAGTGAGAGTGTGGCTAAGAGGAGATCAAAGTTATCCAGTGCTTCTAAACCAGCTGCCACTGCCTAG 648 0.4769 MKFNVANPTTGCQKKLEIDDDLKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESVAKRRSKLSSASKPAATA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00950 215 Gene3D - 157 200 - -
Car03g00950 215 PANTHER 40S RIBOSOMAL PROTEIN S6 1 157 IPR001377 GO:0003735|GO:0005840|GO:0006412
Car03g00950 215 PANTHER 40S RIBOSOMAL PROTEIN S6 157 215 IPR001377 GO:0003735|GO:0005840|GO:0006412
Car03g00950 215 Coils Coil 155 182 - -
Car03g00950 215 PIRSF RPS6e 1 158 IPR014401 GO:0003735|GO:0005840|GO:0006412
Car03g00950 215 PIRSF RPS6e 156 215 IPR014401 GO:0003735|GO:0005840|GO:0006412
Car03g00950 215 MobiDBLite consensus disorder prediction 185 203 - -
Car03g00950 215 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Car03g00950 215 Gene3D - 133 156 - -
Car03g00950 215 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Car03g00950 215 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Car03g00950 215 PANTHER 40S RIBOSOMAL PROTEIN S6 1 157 - -
Car03g00950 215 PANTHER 40S RIBOSOMAL PROTEIN S6 157 215 - -
Car03g00950 215 MobiDBLite consensus disorder prediction 185 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00950 Car-Chr3 49413544 49416313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00950 1 214 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 76.279 3.27e-111 315