Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00939 ATGGTGAATTTTGTGCCAGCCGCCATAGGTCAGAACACCTATATTAGCCACCATGTTTTCGCCAGAGGCTACAACACCGAAGCTAGCGCTAGATATGATATTGTGTCGGCTAGTGGCACCGCCAATTCTTCTGCCTTGACAATGATGCATCTGAAACAATTATTTTTTGTCATCTCTTTGAGCTACAAACATTGTTGCCAAGCAAAAAAATTGCTTAGAGGGAATGCAGGTTGGGGTGGCTTAATATATGTATGTACGTGTACTGTGTTGTCTATACATGTTACTATCATTGGTGATGGTCCTACAAAGACTAGATTCACTGCTAGCCTTAACTATGTTGATGGTGTCCAAACTTACAACACTGCAACTTTTGGTGTAAATGGTGCAAACTTCATGGCAAAGGATGTTGGATTTGAAAACACAGCAGGAGCAGAGAAACATCAAGCAGTAGCACTACGAGTAACAGCAGATCAAGCAGTATTCTACAACTTTCAAATGGATGCTCTTCTCGAAAAACCCATCACAAAAATTGATGAGCAATATGTAGAACCAGCAAACCATAGTCTTGAGGATGCACAAGCACCGCAAATAAATTCATCTGAAACCACACTTGAAGAAGTCTTAGCAGTTCTAGAGGATAATGGGAATGACAATGTATCCAATACAGAAGATTTGGAAGTTATTACATGTGAAGAAAAGAATTCAGAGGAAGCTAAAGAACCCGATAATGCACAAAACACAGAAAAGAAGGTACCGGGAAAAGAAAGCTACAAAGTCAAGGCAAAAGTAGAGGTGTTGACCCAGCTCTCTTTTTCAAAGATGAAGCAGTTATTAACAGTATAA 843 0.3986 MVNFVPAAIGQNTYISHHVFARGYNTEASARYDIVSASGTANSSALTMMHLKQLFFVISLSYKHCCQAKKLLRGNAGWGGLIYVCTCTVLSIHVTIIGDGPTKTRFTASLNYVDGVQTYNTATFGVNGANFMAKDVGFENTAGAEKHQAVALRVTADQAVFYNFQMDALLEKPITKIDEQYVEPANHSLEDAQAPQINSSETTLEEVLAVLEDNGNDNVSNTEDLEVITCEEKNSEEAKEPDNAQNTEKKVPGKESYKVKAKVEVLTQLSFSKMKQLLTV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00939 280 PANTHER PECTINESTERASE 92 180 - -
Car03g00939 280 MobiDBLite consensus disorder prediction 232 255 - -
Car03g00939 280 PANTHER PECTINESTERASE 92 180 - -
Car03g00939 280 SUPERFAMILY Pectin lyase-like 91 166 IPR011050 -
Car03g00939 280 Pfam Pectinesterase 92 169 IPR000070 GO:0030599|GO:0042545
Car03g00939 280 Gene3D - 82 183 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00939 Car-Chr3 49084437 49086370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00939 93 168 Carbohydrate Esterase AT5G49180 70.130 6.75e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00939 K01051 - gmx:100784682 138.272