Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00921 ATGGTCAACTTGTTATTGGTCTTGCTTCACATTTCCCTGAGCTTTGTTTTGACTCAATCAGCACCAAAAGAGTCTCTAATCACCAAACTTCCTGGCTTCAATGGTACTATACCTTCCAAACACTATGCTGGGTATGTGACAGTGGATGAGATTCGTGGAAAAAACTTGTATTACTATTTTATTGAATCACAAAGTAATCCATCAAAGGACCCTGTTGTTCTATGGCTTAATGGTGGACCAGGATGCTCTAGCTTCGATGGCTTTGTATATGAGCACGGTCCTTTTAATTTTATAAAATCAAAGACTAAGGGAGCTCTGCCTACATTGCAACTCAATCCATACAGCTGGTCATTGGTTTCCAACATTATATATTTGGACTCTCCCGTTGGAATTGGATTTTCATACTCAAAGAATATATCTGATTATAAAACTGGAGATATTAAGACCGCTTTTGATACACACAGATTTCTGCTCAAATGGTTTGAATTATACCCTGAGTTCCAAACCAATCCATTATTCCTTTCTGGAGAGTCTTATGCTGGAGTTTATGTACCTACTCTTGCTCATAAAATAGTGAAAGGAATTGAAGCTGGTGCCAAGCCCAAACTGAATTTCAAGGGTTATATGGTTGGAAATCCTGTTACAGATGACAGATTTGATGGCAATGCTCAGATTCCATTTGTACATGGGATGGGTCTTATATCTGAGAAAATGTTCCAGGACACAACAAGAGAATGTAAAGGGAACTTCTATGACTCACATAGTCATAGTTGCTCTCATATGTTGACAAAAGTTGACACGGCACTTGGAAATTTAAACATATATGACATTCTAGAGCCATGTTATCATGGAGAAACAGAAAAATTAAATTCAAAGTTGCCATTAAGCTTTAGGCAATTGGGTAAGACTGATAAACCTTTGCCTGTGAGAAAAAGAATGTTTGGGCGTGCTTGGCCCTACAAAGTTCCTTTCAAAAATGGAATTGTACCAAGTTGGCCACAACTCATGAGCAGCAATAATCATGTTCCTTGTATTGATGACGAGGTTTCTGTTATATGGTTGAACAATCCTGAGGTCAGGAAAGCTATTCACACTGTGGAGAAAAGTGTTAAGGAGTGGAGCCTATGTACAAATATTGAATACTATCATGATACTGGGAGCATGATTCCATACCACAAGAAACTTACTTCAAAAGGATATCGAGCATTAATATACAGCGGTGATCATGACATGTGTGTCCCATATACTGGAACCGAAGCATGGACAAGTTCAATTGGTTATAATATTGTTGATGAATGGAGGCCATGGTTAACCAATGGTCAAGTTGCTGGGTATACACAAGGATATGCCAACAATTTAACATTTGTAACAGTAAAGGGATCTGGACACACTGTTCCTGAATATAAACCAGCCGAAGCATTGCATTTTTACAGCCATTTTATAACTGGGAAGCCTCTGTAA 1461 0.3833 MVNLLLVLLHISLSFVLTQSAPKESLITKLPGFNGTIPSKHYAGYVTVDEIRGKNLYYYFIESQSNPSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFIKSKTKGALPTLQLNPYSWSLVSNIIYLDSPVGIGFSYSKNISDYKTGDIKTAFDTHRFLLKWFELYPEFQTNPLFLSGESYAGVYVPTLAHKIVKGIEAGAKPKLNFKGYMVGNPVTDDRFDGNAQIPFVHGMGLISEKMFQDTTRECKGNFYDSHSHSCSHMLTKVDTALGNLNIYDILEPCYHGETEKLNSKLPLSFRQLGKTDKPLPVRKRMFGRAWPYKVPFKNGIVPSWPQLMSSNNHVPCIDDEVSVIWLNNPEVRKAIHTVEKSVKEWSLCTNIEYYHDTGSMIPYHKKLTSKGYRALIYSGDHDMCVPYTGTEAWTSSIGYNIVDEWRPWLTNGQVAGYTQGYANNLTFVTVKGSGHTVPEYKPAEALHFYSHFITGKPL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00921 486 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Car03g00921 486 Pfam Serine carboxypeptidase 31 482 IPR001563 GO:0004185|GO:0006508
Car03g00921 486 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 12 484 - -
Car03g00921 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 453 470 IPR033124 GO:0004185
Car03g00921 486 SUPERFAMILY alpha/beta-Hydrolases 27 485 IPR029058 -
Car03g00921 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Car03g00921 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Car03g00921 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Car03g00921 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Car03g00921 486 Gene3D - 341 486 - -
Car03g00921 486 Gene3D alpha/beta hydrolase 19 303 IPR029058 -
Car03g00921 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 484 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00921 Car-Chr3 48627572 48633270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00921 349 486 Calmodulin-binding Proteins AT2G22960 49.640 2.24e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00921 K16296 - gmx:100792057 731.865