Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00920 ATGGCCATTAATATGTTATTGGTCTTGCTTCACATTTTTCTGACCTTTGTCTTAACACAGTCAGCACCTCAAGATTCTCTTGTAACCAACCTTCCAGGCTTTAATGGTTCTCTAAATTCCAAGCACTATGCTGGGTATGTGACAGTGGACGAAAGTCATGGTAGAAACTTGTATTACTATTTTGTTGAATCAGAAAGTAATCCATCAAAGGACCCTGTTGTTCTATGGCTTAATGGTGGACCAGGATGCTCTAGTTTTGATGGCTTTGTATTTGAGCATGGTCCTTTTAATTTTGAAAAACCTGCCACAAAGGGAGCATTGCCAAAGTTGCAACCCAATCCATACAGCTGGTCAAAGGTTTCCAACATTATATATTTAGACTCTCCTGCTGGAGTTGGGTTTTCATACTCAAAGAATGTATCTGATTATAAAACTGGAGATATTCAGACTGCTTATGATTCACACATTTTTCTTCTCAAATGGTTTGAATTATATCCTGAGTTTCAAGCCAACCCATTATTTCTTTCTGGAGAATCTTATGCTGGAGTATACGTGCCTACTCTTGCTAATCAAGTAGTGATAGGAATTGAAAATGGAACCAAGCCAACATTGAATTTCAAGGGTTATATGGTTGGAAATCCTGTTACGGATGATAAGATTGATGGCAATGCTCTTGTTCCATTTGCACATGGGATGAGTCTTATTTCTGATGAACTTTTTGAGAACACAACAAAAGCATGCCATGGAAACTTCTTTAATCCAGAAACCGAGAAGTGCGATAATTTGTTGCAAAAAGTCGACCAGACAATTGGCCATTTAAACGTGTATGACATTCTAGAACCATGTTATCATCATGGAGAGACAGAGGAGAATAAAAATTCAAATTCTAAGTTGCCATTAAGCTTTAAGGAATTGGGTAAGACTGAAAAATCTTTAGCTGTGAGGAAAAGAATATTTGGTCGTGCTTGGCCCTACAGAGGTAATGTGAAAGATGGAATTGTACCAAGTTGGCCAGAACTCACGAGCGCCAATGGCTATGTTCCTTGCGTTGATGATGGGGTTGCTACTGCATGGCTAAACAATCCTGATGTCAGGAAAGCTATTCACACTGTGGAGGAAAGTGTGGTTGATGCGTGGTCCTTATGTACCGACCAAATTCAATACAATCATGATACAGGGAGTATGCTCAATTTTCACAAAAAACTTACTTCCAAAGGATATCGAGTATTAGCATTTAGTGGTGATCATGACATGTGTGTCCCACATACTGGAACCGAAACATGGACAAGATTAATTGGAGTTAAGATTGTTGATGAATGGAGGCCATGGTTCAGTAATAATCAAGTTGCTGGGTATACTCAAGGATATGCCAACAATCTCACGTATCTCACAATAAAGGGATCTGGACACACTGTTCCAGAATATAAGCCACGAGAGTCATTGCATTTTTACAAACGTTTTCTAGATGGAGTGCCAATATAA 1482 0.3887 MAINMLLVLLHIFLTFVLTQSAPQDSLVTNLPGFNGSLNSKHYAGYVTVDESHGRNLYYYFVESESNPSKDPVVLWLNGGPGCSSFDGFVFEHGPFNFEKPATKGALPKLQPNPYSWSKVSNIIYLDSPAGVGFSYSKNVSDYKTGDIQTAYDSHIFLLKWFELYPEFQANPLFLSGESYAGVYVPTLANQVVIGIENGTKPTLNFKGYMVGNPVTDDKIDGNALVPFAHGMSLISDELFENTTKACHGNFFNPETEKCDNLLQKVDQTIGHLNVYDILEPCYHHGETEENKNSNSKLPLSFKELGKTEKSLAVRKRIFGRAWPYRGNVKDGIVPSWPELTSANGYVPCVDDGVATAWLNNPDVRKAIHTVEESVVDAWSLCTDQIQYNHDTGSMLNFHKKLTSKGYRVLAFSGDHDMCVPHTGTETWTRLIGVKIVDEWRPWFSNNQVAGYTQGYANNLTYLTIKGSGHTVPEYKPRESLHFYKRFLDGVPI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00920 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 460 477 IPR033124 GO:0004185
Car03g00920 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 490 IPR001563 GO:0004185|GO:0006508
Car03g00920 493 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Car03g00920 493 Gene3D alpha/beta hydrolase 21 294 IPR029058 -
Car03g00920 493 SUPERFAMILY alpha/beta-Hydrolases 28 492 IPR029058 -
Car03g00920 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Car03g00920 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Car03g00920 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Car03g00920 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Car03g00920 493 Pfam Serine carboxypeptidase 32 490 IPR001563 GO:0004185|GO:0006508
Car03g00920 493 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 14 490 - -
Car03g00920 493 Gene3D - 346 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00920 Car-Chr3 48585618 48591349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00920 353 493 Calmodulin-binding Proteins AT2G22960 45.390 1.42e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00920 K16296 - gmx:100792057 736.487