Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00914 ATGGCTAATGAAATTTCTCAAGTGAAACCATTCCACTTTTTCAAGATCATACTTAATCAAAGCCTTCGTGAAGGAAAGCTTATGATTCCAAGAAAGTTTGTGGAGAAATATGGAGAAGGTTTACCAAAAACAATATCTCTCAAGCCTCCAAATGGTAAAGAGTGGAAATTAGATTTGATAAAAAGTGATGGTAAAATATGGTTTGGAAAGGGTTGGAAAGAATTTGCAGACTATCATTCTCTGGCTCATGGCCATCTTCTGGTTTTCAGATATGAAAAAGCTTTTCATTTTAAGATACACATATTTGATATGAGTGGCTTAGAGATAAACTATCCTTTCAGAGGAGTAGAAGCTAAAAGGGTCTACAATAGTAACGGAAATATCTCCAAATAA 393 0.341 MANEISQVKPFHFFKIILNQSLREGKLMIPRKFVEKYGEGLPKTISLKPPNGKEWKLDLIKSDGKIWFGKGWKEFADYHSLAHGHLLVFRYEKAFHFKIHIFDMSGLEINYPFRGVEAKRVYNSNGNISK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00914 130 SUPERFAMILY DNA-binding pseudobarrel domain 7 105 IPR015300 -
Car03g00914 130 Gene3D - 4 106 IPR015300 -
Car03g00914 130 CDD B3_DNA 11 103 IPR003340 GO:0003677
Car03g00914 130 PANTHER B3 DOMAIN-CONTAINING 4 119 - -
Car03g00914 130 Pfam B3 DNA binding domain 13 103 IPR003340 GO:0003677
Car03g00914 130 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 4 119 - -
Car03g00914 130 ProSiteProfiles B3 DNA-binding domain profile. 12 105 IPR003340 GO:0003677
Car03g00914 130 SMART B3_2 13 105 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00914 Car-Chr3 48450348 48451443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00914 9 116 B3 DNA Binding Superfamily AT3G18990 42.593 9.45e-26 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car03g00914 B3 2e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00914 - - mtr:MTR_7g050580 190.274