Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00907 ATGGACAAGGGAAATGAGGCAGATCATACCTGTCTAGAAAAGAGTACAAGTATATTTGATGGTGttgaagttcaagagccatatgtgggcatggaatttgattctgaagaagctgccaagaaattttattttgaatatgctagacgggtaggatttgctgtacgtgttatgcaacgtcgacgttctggaattgatggcaggactcttgctcgtcgacttggatgtaacaaacaaggattctcacccaataacaagggaacattggggctagagaaaaaactaaggcatagtgctcgagaaggttgcaaggcaacaattttattcaagctggaaaaatctggaaaatgggttgtctcaagatttgtaaaggatcacaaccatCCTTTAATTGCTACAGCTAATGGTTTCAATTCAGCGGACGATAAAGATAAAAAAATTGCTGAACTTACTATCGAATTGGAGCGCCAAGATGAACTGTGTGCTGCGTATAGAGAAAAACTAATGAGCTTCATAAACAATGTTGAGGAGGAAACAGTGGAAATGTCCACAAGAATTCAACTCATTATTGAAAATGTAAGGAGAGCTGAGTCTGAATTGCAAAAATGTTCCCAGAACAGTAAGCCTCGGTACTGTACTTGA 639 0.1925 MDKGNEADHTCLEKSTSIFDGVEVQEPYVGMEFDSEEAAKKFYFEYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNNKGTLGLEKKLRHSAREGCKATILFKLEKSGKWVVSRFVKDHNHPLIATANGFNSADDKDKKIAELTIELERQDELCAAYREKLMSFINNVEEETVEMSTRIQLIIENVRRAESELQKCSQNSKPRYCT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00907 212 Coils Coil 139 166 - -
Car03g00907 212 Coils Coil 185 205 - -
Car03g00907 212 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 205 - -
Car03g00907 212 Pfam FAR1 DNA-binding domain 41 130 IPR004330 -
Car03g00907 212 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 13 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00907 Car-Chr3 48169395 48175651 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car03g00907 FAR1 2.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00907 - - vun:114183030 350.903