Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00900 ATGTCCTTCAATCAATCAAAGTCCGATAACCGACGATCCGGCCGATCCGCCAGCTTTAATCAACAGCGAGGTTCCTCCGGTGGTTCCTACGTTAACAAGAGCGGCACCGGCGCGGCTGCGCCTTCACCCTCACTTTCCTCTTCTCGGAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGACCATCTAGGGTAAACCCTACCCCAGCCAATTCAGCTGAGTTTAATTATGCTTCTGCAGTCCGGACAACACCAAATGGTTCCCATGTACAGCCGCAATTTCATGGTGGATCTGATGCACCAGTTACTAATGCAACTGCCAAGCCATCTGAATCATCAGCTGCACAGAGGAGCACCAGAGTTGTTCCTAAAGCTCCTCCTACTTCTCAACCTCCCCCCGTGAGTTCAGATTCAGCAGCACCTACAACCCCTCCTAAGGGTGATGCATCCGTAGCATTCCCTGTGCAATTTGGATCTATTAGTCCAGGAATTATGAATGGGATGGCAATTCCTGCTCGCACAAGCTCGGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGTTCGTCATGATTCTTCAAGACCTGTGCCTTCTGTACCAACACCTCCTGTTCCAAAGCAGCTGCCAGTGAATAAGGATACTGGTGTCACAGGCCAATCTAAGGCTGGGGAGACTCACACTGGTACAAGGCCAAAAAAGGATACTCAAGTGTTACCTGCAGCAAGCTTGATGCAGAAGCCTGCTGTTATTCCTCTACCTGGAATTTCAATGGCAATGCCATATCGTCAGTCACCAGCACCCTTACACTTTAGTGCTGCTAATCCCCAAATTCATTCTCAGGGTATGTCAACAGCACCTCTTCAAatgcctttgccgatgccgatgccgttaccaatTAGAAATGCTGGACAAGTGCAGCAACAGATATTCGTTCCAAGTATTCAACCTCACCCTATTCATCATCAAGGCCAACATATAGGTTACAGTCCTCAAATTGGTCATCAATTTCCCCATCAGTTAGGCAACATGGGCATCAACCCACAATATTCCCCACAACAAGGAGGAAAATTTGCTGTACCTCGTAAAACTACTCCTGTGAAAATAACTCACCCTGATACACACGAAGAGCTTAGACTTGATAAAAGGGATGACAATGGTGGGTCTTCTGGTGCTAGGTCTCATTCTGGCATGCCTTCTCAATCTCCATCTGTCCAGCCATTTGCTGCTTCTCATCCTGTGGGTCACTATGCATCCAATTCTCTCTTTTATCCAACTCCTAATTCTCTTCCTTTATCCAGTAGCCAGATTACCCCCAACACGCACCCACCAAGATTAGGTTATGCAGTGAACCATGGTCCACAAAATGGTGGTTTCACGAATTCATCATCATCTAATAATTCCCTGCCTGTTGATAAAATAGTCACTTCTATTTCCGGTAATGTTCAACCACTGAATACAGAAATTTCCTGTGATGTGCTGAATGCAATCTCATCAACTATGTCTGGAGCATCTTCTGTGTCTATAAAGCCAAGTGGTAGGTCTGGTGTTGTGAACTCAACATATGCCAATTCCAGTATTTCTGGTGCTCAAAAGGGTGGATCTCCTAGTTCCTCGATAACATCTAGTGATGTTGGCTCTTCTGTGCCACAAAAAGGGCCTGAAATTTGTTCTGGAATCTCTTCGGAACAATCTACTGCTGCATCTTCTGAGAAGCTTACATCAGCTTCCTTGTTATCTTCTTCGTCTGCTTTGAGTGAGGATTCTGCACTAGTTGTAACCAATAACGAAGGCAGAAAAAAGGAATCTCTTAGTAGGTCAAATTCTCTGAAGGATAATCAGAAGAAACTACAAAAGAAAGGCCAGTTGCAGCATCAGGTGACTGTACAATCTTCTGATGTGGCTAATGAACCATCCTTAGCTGTTTCTGAAACTGTAGGAGCTAAAACAATCCATTCTGCAGCAATTGCTGGTGAAGATATATTAGCAGCAGCTTCAGGCACATTGTCAGCTACCAGTGAGAACATGCCTTCTGCCGAAGTTAAAGAGAAGACCAGTAGTTCTACACAGGTTTCTACTTGTGCTTCAGCTGTAGGACCTGTTACTCAAGCTGTGGATAGTTTGAACAAACATAAGAGTGCTGAGGTAGATGATTTAGCCCAAGAGAATAAACTGTTAAGCCATAACATTTTGGAAAGGGGTGATAAATCTGAAATTTCAACTCTTCAGAGATGTAAAAATGCTAGTGACGGTGGGACAGAATTTAATCAACTCAAACAAGGTGTTACAGAGTTAAGTTCTGAGGATGTAACTATAAGAACTGGACAGCATGGGCAGGGTGAATCTGCAAGTTACGGCACAGAGTGTGACCAGATGACTAATAATTTAGGCATGTCTACCTCTACTGCATTGGATTCTAAAGCTGTCTCTCTAAACAGAAATGATAGTGTAGTTAGTAATGAAGCTATTTCTACAACTTCTGGCTCATCAGATCAGCAATCTTCTGATCTTATAGAAACAACTTCAGAACATTGCAAGGATAGTTCAGAGGATGCTGGTAGTGGCTCGTTGTCTCTTCCAGAAGCATCTGGTACTAAAGACAAACCAATTTTAGAACCAAGCAAGGTGAAAGCTACATCAAAAGGAAAAAAGAAACGAAAGGAGGTTCTTCTGAAAGCAGATGCTGCTGGGTCAACATCTGATCTTTATAATGCTTATAAGGGACCTGATGATAAGAAAGAAGCTGTTGTAAGTTCAGAAAACACTGAAAATGTTACTACTTCTGGAGATTCGAAGCAGTTTTCTGTGGATGCTGTTCAGCCAGATGCAGTTGCAACTGAACAAGGTGGGAAGAGTAAGGCTGAACTTGAGGACTGGGAGGATGCTGCCGACATGTCCACACCAAAGCTAGAAGTATCAGATAAAACACAACAGGTTAGCGATGGAAGTGCAGTTACCGATAAAAAGTACTCTCGAGATTTCCTTTTGAAATTTGCAGAGCAATGCACTGATCTCCCTGAAGGGTTTGAAATCATGGCAGACATAGCCGAAGCTTTGATGAGTTCTAATATTGGTTCTCATGTTATTGGACGCGATTCACATCCTTCTACTGGAAGAAATGCAGATAGGTCAGGTGGGATGTCGCGGATGGATCGTCGTGGGAGTGGTGTTATTGAGGACGATAAATGGAGTAAAGTTTCTGGTGCCTTCCATTCTGATATGCGTTTGGATGGTATTGGAGGTAATACAGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGTACACCGACTGCTATGCAATATGGTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGTGAAAGGTGGCAGCGTGCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCTTTACCAACGATCCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTTACAGATGAAGAACAGGCCAAGCAGAGGCAGTTGAAAGCTATATTAAACAAGTTAACTCCCCAGAATTTTGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGTCATCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAAGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCACTTTCTGTTTTCATCTGGCAGCTGCATTACCTGATCTCAGTCAAGACAATGAAAAGATAACATTCAAAAGATTATTATTAAACAAGTGCCAAGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCGAAACGAACCAAGGCTCGAAGACGAATGTTGGGTAATATCAGATTGATTGGAGAACTGTATAAGAAGAAAATGTTGACAGAGAGGATAATGCACGAGTGCATCAAAAAATTACTAGGTCAGTTTCAGGATCCCGATGAAGAAGATATTGAAGCTTTATGCAAATTGATGAGTACTATTGGCGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGATGAAATCATTATCAAACAATATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAGCAAAGGAGAAAAGTGGAAGGTCCAAAGAAGATTGAAGAGGTGCACAGAGATGCTTCGCAAGAGAGGCAGGCCCAAGCTGGTAGGCTGAGTCGTGGTCCGGGTATTAATACGGCAAGAAGGATGCCTATGGATTTTGGTCCAAGAGGTTCGTCTATGTTAACTTCTCCTAATGCCCAGATTGGTGGACTGCGTGGGTTGCCTACTCAAGTTCGTGGGTATGGTTCTCAGGATGTTCGTGGGGGTGAAAGGCAATCTTATGAGGCCAGGACACTGTCTATTCCCTTGCCTCAAAGGCCTTTGGGTGATGACTCAATAACCTTGGGACCACAGGGTGGTCTTGCTAGAGGAATGTCTATTAGAGGTCCTTCTGCAGTATCAAGTTCGATTGGTCTTAATGGTTACAGTAATTTACCAGAGCGCCCTTCATATAGCTCTAGGGAGGACCCCACTCCAAGATACGTTCAGGATAGATTTGTTGGTTCAACTACTTACGATCAATCAATTATTGAAGAGCATAATATGAATTATGGTAACAAGGATATGAGAAATGTTGATAGGATTATTGATAGACCTGTTGTAAATCCACCTCTTGTCCATGCACAAGGGACAGTAGGATCCCAGAGTACCTCCTCAGAAAAGGGTTGGTCAGAAGAGCGACTACAGAATATGTCCATGGCAGCAATTAAAGAATACTATAGTGCAAGAGATGTGAAAGAAGTTGTTTTGTGCGTCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCATTCGAGCGAAAGGACACAGAGAGAGATCTTTTGGCAAAACTGCTGATCAGCCTTGTGAAATCTCCTGATGGCACCTTAAGTCAGGCCCAGCTCATTGAAGGGTTTGAATCTGTTTTAACTACTTTGGAAGATGTTGTTACGGATGCCCCAAAAGCACCGGAGTTTCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAATCTCTTTGAAAGAGATTGGGCGGTTAATACGTGACGGCGGAGAGGAACCAGGGAGCCTCTTACAAATTGGACTTGCAGCTGATATTCTTGGAAGCACCTTGGAAGTGATACAAACAGAGGAAGGTGATGCCTCATTGAATGAGATCCAGACAAATTCAAAATTGCAGTTGCAGACCTTCCGGCCGCCAGAACCTATTAAATCCCGGAAGCTAGAGAAATTCATTTAG 5421 0.4324 MSFNQSKSDNRRSGRSASFNQQRGSSGGSYVNKSGTGAAAPSPSLSSSRSFNKKSNNHAQGGPSRVNPTPANSAEFNYASAVRTTPNGSHVQPQFHGGSDAPVTNATAKPSESSAAQRSTRVVPKAPPTSQPPPVSSDSAAPTTPPKGDASVAFPVQFGSISPGIMNGMAIPARTSSAPPNLDEQKRDQVRHDSSRPVPSVPTPPVPKQLPVNKDTGVTGQSKAGETHTGTRPKKDTQVLPAASLMQKPAVIPLPGISMAMPYRQSPAPLHFSAANPQIHSQGMSTAPLQMPLPMPMPLPIRNAGQVQQQIFVPSIQPHPIHHQGQHIGYSPQIGHQFPHQLGNMGINPQYSPQQGGKFAVPRKTTPVKITHPDTHEELRLDKRDDNGGSSGARSHSGMPSQSPSVQPFAASHPVGHYASNSLFYPTPNSLPLSSSQITPNTHPPRLGYAVNHGPQNGGFTNSSSSNNSLPVDKIVTSISGNVQPLNTEISCDVLNAISSTMSGASSVSIKPSGRSGVVNSTYANSSISGAQKGGSPSSSITSSDVGSSVPQKGPEICSGISSEQSTAASSEKLTSASLLSSSSALSEDSALVVTNNEGRKKESLSRSNSLKDNQKKLQKKGQLQHQVTVQSSDVANEPSLAVSETVGAKTIHSAAIAGEDILAAASGTLSATSENMPSAEVKEKTSSSTQVSTCASAVGPVTQAVDSLNKHKSAEVDDLAQENKLLSHNILERGDKSEISTLQRCKNASDGGTEFNQLKQGVTELSSEDVTIRTGQHGQGESASYGTECDQMTNNLGMSTSTALDSKAVSLNRNDSVVSNEAISTTSGSSDQQSSDLIETTSEHCKDSSEDAGSGSLSLPEASGTKDKPILEPSKVKATSKGKKKRKEVLLKADAAGSTSDLYNAYKGPDDKKEAVVSSENTENVTTSGDSKQFSVDAVQPDAVATEQGGKSKAELEDWEDAADMSTPKLEVSDKTQQVSDGSAVTDKKYSRDFLLKFAEQCTDLPEGFEIMADIAEALMSSNIGSHVIGRDSHPSTGRNADRSGGMSRMDRRGSGVIEDDKWSKVSGAFHSDMRLDGIGGNTGFRPGQGGNFGVLRNPRTPTAMQYGGGILSGPMQSMVNQGGMQRNSPDGERWQRAASFQQRGLIPSPLPTIHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNVITLTGVISQIFEKALMEPTFCEMYATFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREAKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQFQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFERMKSLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDASQERQAQAGRLSRGPGINTARRMPMDFGPRGSSMLTSPNAQIGGLRGLPTQVRGYGSQDVRGGERQSYEARTLSIPLPQRPLGDDSITLGPQGGLARGMSIRGPSAVSSSIGLNGYSNLPERPSYSSREDPTPRYVQDRFVGSTTYDQSIIEEHNMNYGNKDMRNVDRIIDRPVVNPPLVHAQGTVGSQSTSSEKGWSEERLQNMSMAAIKEYYSARDVKEVVLCVKDLNSPSFHPSMVSLWVTDSFERKDTERDLLAKLLISLVKSPDGTLSQAQLIEGFESVLTTLEDVVTDAPKAPEFLGRIFAKAITEHVISLKEIGRLIRDGGEEPGSLLQIGLAADILGSTLEVIQTEEGDASLNEIQTNSKLQLQTFRPPEPIKSRKLEKFI 1806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00900 1806 SMART if4_15 1175 1397 IPR003890 GO:0003723|GO:0005515
Car03g00900 1806 MobiDBLite consensus disorder prediction 1400 1468 - -
Car03g00900 1806 Pfam MIF4G domain 1175 1397 IPR003890 GO:0003723|GO:0005515
Car03g00900 1806 MobiDBLite consensus disorder prediction 1028 1055 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 369 390 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 1523 1551 - -
Car03g00900 1806 Pfam MA3 domain 1625 1732 IPR003891 -
Car03g00900 1806 SMART ma3_7 1619 1733 IPR003891 -
Car03g00900 1806 SUPERFAMILY ARM repeat 1169 1399 IPR016024 -
Car03g00900 1806 Gene3D - 1175 1410 - -
Car03g00900 1806 ProSiteProfiles MI domain profile. 1618 1742 IPR003891 -
Car03g00900 1806 Gene3D - 1610 1806 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 920 936 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 1 125 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 901 979 - -
Car03g00900 1806 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 129 1796 IPR045208 GO:0003743
Car03g00900 1806 MobiDBLite consensus disorder prediction 367 413 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 821 840 - -
Car03g00900 1806 SUPERFAMILY ARM repeat 1612 1801 IPR016024 -
Car03g00900 1806 Coils Coil 1257 1277 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 1266 1295 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 1400 1421 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 526 565 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 952 969 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 391 409 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 1523 1542 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 821 888 - -
Car03g00900 1806 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 129 1796 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 126 140 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 770 799 - -
Car03g00900 1806 MobiDBLite consensus disorder prediction 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00900 Car-Chr3 47982790 48030087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00900 1 771 Eukaryotic Initiation Factors Gene Family AT3G60240 31.846 1.36e-62 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00900 K03260 - gmx:100796636 2451.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03339 07 61402272 61428568 Car03g00900 03 47982790 48030087 PCT