Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00897 ATGCAACTCCATAATCTTTGCATTGTTTTACCACCAAATTCAGGTGAAATAATAAAACAGAATGAAAAGGGTCATCAAAAATCTTTTCAATCTTCAAAGAAACACAAAGTTAAGTCCAAAAGGCCTTCAAGGTCTTGTGGTGGACAACAACAAGTTCTTGATTTGATTCATGATTCATTAAACAAGTTGTGTAGTTTAAGGTTGTGGAAATTTTGCCAACATAGGGGGATGCAAAAAGAGAAAAGGAAGAACACTTCAAGTGTGGTTTTTCATGACATGGATGGTGTTCAATTTGCTGTCAAGATTGGAAGAGACAATCCAAGGATTTTTAGCTATGCAGAACTTTTCATAGGTTCAAATGGTTTCAATGAAGAACAAGTTCTAGGGAGTGGTGGATTTGGCAAAGTTTACAAAGCTGTTTTACCAAGTGATGGAACTTTGGTTGCTGTCAAATGCTGTTTATCAGAAAAAGGGAAGCAATTTGACAAAAGTTTTCTAGCAGAGTTAAACGCGGTAGCCGATCTTCGACACAAGAATCTTGTGAGGTTAAGAGGTTGGTGTGTTCATGAAGATCAATTACATCTTGTTTATGATTACATGCGGAATCGCAGCCTTGACCGTGTACTCTTCCGAAGGCCTAAGAATTCGAAAGGCGATGATTCGACTCTCGGTTGGACACAAAGAGGTAAAATTGTTAAAGGTTTAGCTGCTGCATTGTATTATTTACATGAACAATTAGAGACTCAAATCATTCATAGAGATGTTAAAACAAGTAATGTTATGCTTGATTCACATTACAATGCTAAGTTAGGTGATTTTGGAATGGCAAGATGGctagaacatgaacttgagcttgaattcaagtacaactACAATCAAAACAATAGTAAGAAAACATCAAGTAGAATTGATCATTTCAAGTTAGGACAAACATCAAGAATTGGTGGAACAATTGGTTATCTTCCACCAGAAAGTTTGCAAAAACATAGCAATGGTACTACTTCAAAATGTGATGTATTCAGCTTTGGTATAGTTGTTCTTGAAGTTGTATCAGGAAGGAGAGCAATAGATCTAACATACCCAGATGAGAAAATCATTTTGGTTGATTGGATTAGAAGGCTTTGTGATGAAGGGAAGGTTCTAGAAGCAGCTGATACTAGACTAGTACATGATGTTGATGGATCATACAATTTTTCTGAGATGAAACATTTTATTCATATAGGCTTACTTTGCACACTTCATGATCCAAATTTGAGGCCTAATATGAAATGGGCTGTGGAAGCACTTTCTGATGTTTGTTTCAAacttccttcacttccttcatttctttcacACCCTCTTTATATCTCTTTGTCTTCTCCTTCTGAGACTAGTCCTAGTAGCATAAGTGGAACTAATTCAGCCACAGAAAATACTAGCTTAATCACAAACTATAGTACTTCATCAAACTATGTCACAGCTCCAATGGAAGAAACAGTTTATGCAACTGCTCAACAAAAAAACAGTGGAAATTGTGGAATTGGAATCATCTCTTCTAAGAGCATGAACCATCAAAACAAGGGAAAATTTCCTGTGGTTGAAACTCCAAGAGAAATATCATACAAGGAAATTGTTTGTGCTACAAATAACTTCTCAGAGTCAAGAAGGGTAGCTGAACTAGACTTTGGAACAGCTTATCATGGGATAATTGATGATAATTGTCATGTTTTGATAAAAAGGTTGGGGATGAAGACGTGTCCTGCATTGCGCGATAGATTCTCAAATGAACTAAGGAATCTAGGAAGGCTTCGGCATCGGAATTTGGTTCAGCTTCGAGGATGGTGCACTGAACAAGGAGAGATGCTTGTTGTTTATGATTACTCAGCAAGTAGGATTCTAAGTCAAAAGCTTCTTCAGATTCATAACAACAAAGGTGTGAATGGAGATTCTGTTCTTCAATGGAATCATAGGTACAATATAGTGAAATCACTTGCTTCTGCAGTTCTTTATCTACATGAAGAATGGGATGAAAAAGTGATTCATAGAAACATTACTTCTTCAGCTGTGATTCTTGAACAAGATATGAATCCAAGACTCACAAGTTTTGCATTAGCTGAGTTTCTGTCAAGGAATGAGCATGGCCATCATGATGCAGCCAAAGATACTGACAAATCGGTTCGGGGGATTTTCGGTTACATGTCTCCGGAATACGTTGAATCGGGCGAAGCAACTACGGCTGCCGATGTTTATAGTTTCGGTGTGGTGGTGCTTGAAGTTGTCAGCGGAACGATGGCAGTCGATTTTCGGTATCAAGAGGTTCTTTTGGTGAAGAAGGTTCATGAATTTGTGATAAGGAAAAGACCATTGAAGGAAATAGCTGATATAAGACTCAATGGTGAGTATAATGAGAAAGAATTGATGAGGTTGGTTAGATTAGGAATTGCATGCACTTCTTGTGATCCTAAATTAAGACCAAACATGAGACAAATTGTGAGCATACTTGATGGAAATGATAAATTGCTCAACATGAAAAACAAGGAAAGTAGGGAAGAATGGAGAGAAACAAATGCTAGTTCTTTGTCAATGATTAGGAGAATTCAAGCTCTAGGAATACAGTAA 2598 0.3626 MQLHNLCIVLPPNSGEIIKQNEKGHQKSFQSSKKHKVKSKRPSRSCGGQQQVLDLIHDSLNKLCSLRLWKFCQHRGMQKEKRKNTSSVVFHDMDGVQFAVKIGRDNPRIFSYAELFIGSNGFNEEQVLGSGGFGKVYKAVLPSDGTLVAVKCCLSEKGKQFDKSFLAELNAVADLRHKNLVRLRGWCVHEDQLHLVYDYMRNRSLDRVLFRRPKNSKGDDSTLGWTQRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNAKLGDFGMARWLEHELELEFKYNYNQNNSKKTSSRIDHFKLGQTSRIGGTIGYLPPESLQKHSNGTTSKCDVFSFGIVVLEVVSGRRAIDLTYPDEKIILVDWIRRLCDEGKVLEAADTRLVHDVDGSYNFSEMKHFIHIGLLCTLHDPNLRPNMKWAVEALSDVCFKLPSLPSFLSHPLYISLSSPSETSPSSISGTNSATENTSLITNYSTSSNYVTAPMEETVYATAQQKNSGNCGIGIISSKSMNHQNKGKFPVVETPREISYKEIVCATNNFSESRRVAELDFGTAYHGIIDDNCHVLIKRLGMKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQKLLQIHNNKGVNGDSVLQWNHRYNIVKSLASAVLYLHEEWDEKVIHRNITSSAVILEQDMNPRLTSFALAEFLSRNEHGHHDAAKDTDKSVRGIFGYMSPEYVESGEATTAADVYSFGVVVLEVVSGTMAVDFRYQEVLLVKKVHEFVIRKRPLKEIADIRLNGEYNEKELMRLVRLGIACTSCDPKLRPNMRQIVSILDGNDKLLNMKNKESREEWRETNASSLSMIRRIQALGIQ 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00897 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Car03g00897 865 ProSiteProfiles Protein kinase domain profile. 122 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00897 865 Pfam Protein tyrosine and serine/threonine kinase 549 827 IPR001245 GO:0004672|GO:0006468
Car03g00897 865 SMART serkin_6 122 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00897 865 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Car03g00897 865 ProSiteProfiles Protein kinase domain profile. 544 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g00897 865 SUPERFAMILY Protein kinase-like (PK-like) 524 827 IPR011009 -
Car03g00897 865 CDD STKc_IRAK 555 829 - -
Car03g00897 865 PANTHER - 1 864 - -
Car03g00897 865 Gene3D Phosphorylase Kinase; domain 1 95 199 - -
Car03g00897 865 Gene3D Transferase(Phosphotransferase) domain 1 200 434 - -
Car03g00897 865 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 864 - -
Car03g00897 865 SUPERFAMILY Protein kinase-like (PK-like) 107 462 IPR011009 -
Car03g00897 865 Gene3D Phosphorylase Kinase; domain 1 507 620 - -
Car03g00897 865 Gene3D Transferase(Phosphotransferase) domain 1 628 854 - -
Car03g00897 865 MobiDBLite consensus disorder prediction 22 46 - -
Car03g00897 865 Pfam Protein kinase domain 122 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00897 Car-Chr3 47838322 47840919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00897 525 829 Receptor kinase-like Gene Family AT3G53380 35.897 6.53e-56 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car03g00897 PK_Tyr_Ser-Thr 2.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00897 - - gmx:100796108 1256.51