Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00891 ATGGCTCCATCCTCTTCAAGAAGGGGCCCAAAGCCAAAACCCAATGCTGCAGAACCATCTCATCAGGAATCAACCAAAAGGGTACTTTCGTCCAAAAATGTCACCACCAAGAAAATAGCAAGAACTCCACTTCCATTATCAAGAACAACCGAGCGCGAGAAGACTAAACAGCCCCTGAAAAATTTTAAAAACAGTCACAACGAATCCAATAAGAAGAAAACACATATCCCTCCAATTTCTGAATACGAGGAGAAAAGAACCAAACAACGTCGTTTTGACTACAATGCAACACCTTCTTCAAGCAACAGAAACGACGAACGCAAGAAAAAGAATGAAATCACTACCGTCTACGAAAACGCGGCGTCGTTTCCTTCCAATGACGTGGCACGAGAGAAAGTAAGAAAACTACTGAAGCTCTTCCATGGCATGCGTAGACTCTTCTCCATATTATCTCCTTTCGAAACGGCAAAGACTCTTAAAGATCGAGGCAAATTCCTAAACGACAGAAAAGTGTTTATAGGAAAAGTCCCCGGAGTTGAAGTTGGCGACGTTTTTCAATATTGGAATGAACTAAACATCATTGGCCTCCACCGTGAAATGAAATATGAAAAGTACATCGATCACGTGATCAGGGACCGAAAAAGGATTGCTACTAGCGTCGTTTACGACGGTTTAGATGATGACGGATTGGAACATAATGAAGTTTATATTTCTACTGAGTTAAGAGAAAATGCTGAATTATTAGTTAATAGCTTTAATGTTAAAAATGACATTAGAGTTATAATTAAGTGTTTTTTGAAGAATAGTGGTCGCTGCGGCATGGATGTTTATTGTTATTATGGTCTTTATAAGGTTAAACGATGTGGAAGAGAAAGGATGGTTTATACATTTTGTTTGGTTCGAAACTCTGGTCAGGAAGAGGTTGCATGGAATGTATTGATGAAATATGGAATTGATGGAATTAGAAAAGGTTTAATTGTTGAAGATATTTCTCGTCAGAGAGAGGCTGTTCCTATATGTGTGATTAATACTGTGGATAAAGAGAGGCTTACAGTTGAATCTTTTGTTTACAAGACTAAAATGATTTATCCTAATTGGTGTAAACCTATTCCAGTTCCTCATCTAGGGTGTGATTGTGAAGGTAAATGTGGAGATTCTGCGAAGTGTTTATGTGCTGTGAGGAATGGTGGGAAAATTCCATATAATAAGAATAATGTTATTGTGGCATCAGGGGGTGTGATTCATGAGTGTGGTCCTTATTGTAAGTGTAGTGCAGATTGTCCTAATAGAGTGAGTCAAAAAGGGATTAAATTTAATCTTGAGATATTCAGGACTGAAAGAAAAGGGTGGGGTGTGAGGTCACGTGACACAATTCCAGCTGGTAGTTTTATTTGTGAGTATATAGGTGAGGTTATTGAAGATGATGAAGTTGACAAAAGGGTTGATAATGATGAGTATTTGTTTAGTATTGGTGATTATCATATGGATGATAGTGTGTTGAAAGAGGCTTCAAATATGATTAatgatgatgaggatgaggatgaggatgaggatgaggatgaggatgGTGGTGATGAAGAGGTTCTTGTGGATGAGAGTGGTAATGAAAACAATGGTGGGTTTACTATTGACGCTGCTTATTACGGTAATGTAGCGAGATTTATTAACCATAGCTGTTCTCCTAATTTGTTTGGTCAGAATGTTCTTTATGATCACGATGATGGAAGGATTCCACACATCATGTTATTTTCAGCTGAGACCATTCCGAAAATGACGGAGTTGACTTACCATTATCATTACAAGATAGGTCTTGTGCTGGATGGCAATGGGAATGTTAAGACGAAGAACTGCTATTGTGGTGCCTTTGAGTGCGGTGGCAGGTTGTATTAA 1890 0.3746 MAPSSSRRGPKPKPNAAEPSHQESTKRVLSSKNVTTKKIARTPLPLSRTTEREKTKQPLKNFKNSHNESNKKKTHIPPISEYEEKRTKQRRFDYNATPSSSNRNDERKKKNEITTVYENAASFPSNDVAREKVRKLLKLFHGMRRLFSILSPFETAKTLKDRGKFLNDRKVFIGKVPGVEVGDVFQYWNELNIIGLHREMKYEKYIDHVIRDRKRIATSVVYDGLDDDGLEHNEVYISTELRENAELLVNSFNVKNDIRVIIKCFLKNSGRCGMDVYCYYGLYKVKRCGRERMVYTFCLVRNSGQEEVAWNVLMKYGIDGIRKGLIVEDISRQREAVPICVINTVDKERLTVESFVYKTKMIYPNWCKPIPVPHLGCDCEGKCGDSAKCLCAVRNGGKIPYNKNNVIVASGGVIHECGPYCKCSADCPNRVSQKGIKFNLEIFRTERKGWGVRSRDTIPAGSFICEYIGEVIEDDEVDKRVDNDEYLFSIGDYHMDDSVLKEASNMINDDEDEDEDEDEDEDGGDEEVLVDESGNENNGGFTIDAAYYGNVARFINHSCSPNLFGQNVLYDHDDGRIPHIMLFSAETIPKMTELTYHYHYKIGLVLDGNGNVKTKNCYCGAFECGGRLY 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00891 629 MobiDBLite consensus disorder prediction 47 92 - -
Car03g00891 629 Pfam SAD/SRA domain 173 305 IPR003105 -
Car03g00891 629 SMART preset_2 327 422 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g00891 629 ProSiteProfiles SET domain profile. 438 599 IPR001214 GO:0005515
Car03g00891 629 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 46 627 - -
Car03g00891 629 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 46 627 - -
Car03g00891 629 SMART G9a_1 169 305 IPR003105 -
Car03g00891 629 Gene3D - 171 313 IPR036987 -
Car03g00891 629 MobiDBLite consensus disorder prediction 18 43 - -
Car03g00891 629 Gene3D SET domain 319 629 IPR046341 -
Car03g00891 629 SUPERFAMILY PUA domain-like 156 313 IPR015947 -
Car03g00891 629 MobiDBLite consensus disorder prediction 1 110 - -
Car03g00891 629 SMART set_7 438 605 IPR001214 GO:0005515
Car03g00891 629 Pfam Pre-SET motif 330 430 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g00891 629 ProSiteProfiles Pre-SET domain profile. 375 435 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Car03g00891 629 SUPERFAMILY SET domain 323 600 IPR046341 -
Car03g00891 629 MobiDBLite consensus disorder prediction 508 537 - -
Car03g00891 629 MobiDBLite consensus disorder prediction 508 532 - -
Car03g00891 629 Pfam SET domain 449 598 IPR001214 GO:0005515
Car03g00891 629 ProSiteProfiles Post-SET domain profile. 613 629 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00891 Car-Chr3 47480883 47483164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00891 165 629 EF-hand Containing Proteins AT5G13960 36.436 7.81e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car03g00891 SET 4.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00891 K11420 - cam:101497063 1236.86