Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00854 ATGGTGCATATAGGCACTTGCATTGCTAATCTACTAGGACAAGGTGGTTCTAGAAAATATGGACTGACCTGGAAATGGCTCAGATACTTCAAAAATGGTAGAGATAAAAGGGATTTGATTACGTGTGGAGCAGCTGTAGGTGTTGTTGCTGCCTTTCGTGTCCCAGTTGGTGGTGTCCTTTTCGCACTGGAAGAAGCAACTTCATGGTGGACGAGGGCTCTTCTATGGCACACATTCTTTACAAATGTCGTTGTGGATGTGCTGTTGAGGGCTCTTATACAATTTTGTCAAAAAGAGGGAGGTCAATGTGGTCTTTTCGACAAAGGATGA 330 0.4394 MVHIGTCIANLLGQGGSRKYGLTWKWLRYFKNGRDKRDLITCGAAVGVVAAFRVPVGGVLFALEEATSWWTRALLWHTFFTNVVVDVLLRALIQFCQKEGGQCGLFDKG 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00854 109 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 109 - -
Car03g00854 109 SUPERFAMILY Clc chloride channel 1 96 IPR014743 -
Car03g00854 109 Pfam Voltage gated chloride channel 1 93 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car03g00854 109 Gene3D Clc chloride channel 1 109 - -
Car03g00854 109 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00854 Car-Chr3 45528973 45529302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00854 1 109 Ion Channels AT5G33280 65.138 3.49e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00854 K05016 - csin:114290613 169.859