Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00853 ATGGCTCCAAAACCAGGCACAATCATCTCTCTTTTATCAAATTCATTGAGAAGAACCAAACTTTTTTCACCTTTACAGAATTTGAGCCTGCAATCTGATGTCAAATCGAAACCTTTTCCTAAGCTGTTTAGAGCTTTCTCAACTATGCCTTCACCCACTTGTTCCATTTACATATTTGATTCCATTATTTGCATAAGTCATAGGCCTGACTACACCAATAAGGTCAACAGTGGATCCTTTTCCGCTACTGAGCAACTTCTAAAACTGAACCCTGCGCTCGAATCGCTCTTGTTGAAGTTCTCCTATTCAACTTCAATTTTATTAGGGTTGGCGAGGAACTTGTGGACCAAAAGAGATATCTCGAATACTCTTGCAAACCAAATTTCTCAATCGCCACATTTCTTCAATTATGTTTCGAAAGAAAGATTCTTTGGAGCCATTTTGCTTAATTTCCTCCGAGCTCACAAATATAATATAAAGGCAAAAGTAAAGCTTCTTTATTGGGATGGTGGCTCATTTACTGGGGATGGTGAAGATCAGGCTCTTTTTTTTGGATGTTGTGCAGGCGGCCTAGCGACTATTATACACTGCGTTGAATTTCGAGGTCTCTTTCCAAGGACTACTAAAGTGAAATGTCTAAGTGATGCAAGCTTGTTTCTTGATTTAATTGATATATCTGGCGAGCGTACCCTCAGGAATATGTACAATGGTGTTGTAGGTTTGCAGGGCTAA 732 0.3934 MAPKPGTIISLLSNSLRRTKLFSPLQNLSLQSDVKSKPFPKLFRAFSTMPSPTCSIYIFDSIICISHRPDYTNKVNSGSFSATEQLLKLNPALESLLLKFSYSTSILLGLARNLWTKRDISNTLANQISQSPHFFNYVSKERFFGAILLNFLRAHKYNIKAKVKLLYWDGGSFTGDGEDQALFFGCCAGGLATIIHCVEFRGLFPRTTKVKCLSDASLFLDLIDISGERTLRNMYNGVVGLQG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00853 243 Pfam Pectinacetylesterase 179 242 IPR004963 GO:0016787
Car03g00853 243 PANTHER NOTUM-RELATED 179 243 IPR004963 GO:0016787
Car03g00853 243 PANTHER PECTIN ACETYLESTERASE 179 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00853 Car-Chr3 45526808 45534605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00853 136 242 Carbohydrate Esterase AT3G05910 45.652 1.88e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00853 K19882 - gmx:100788448 124.02