Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00849 ATGGCTCATACACTTAAATGTGCATTCTCTCATATACTCATCCTTGTAGGTTCACTCTCGATATTACTAGTGACCCCTTCCTCTTGTTTTAGTCTCAAAAAGGTTGTTAATGTTACTTCATCTAATTATAATTGGTCACCTTCAGTGGCCACTTGGTATGGACTTCCCACCGGAGATGGAAGTGAAGGTGGTGCTTGTGGATATGGAAATGCTGTTGGACAACCTCCATTATCTTCAATGATATCAGCCGGAAGCCCTCTCATCTATCAATCGGGCAAAGGCTGTGGTTCTTGTTATGAGGTGACGTGCATTGGAAATCATGCATGTTCAGGAAATCCTGTGACGGTTACTATTACCGATGAGTGCCCTGGTACTTGTGGATCAGATTCTCCATATCATTTTGATTTGAGTGGTAGAGCTTTTGGTGCCATGGCAATTTCAGGTCAAGATGGAAATCTTCGCAAGGTTGGAAAAATAGTCGTTCAACATAGAAGAGTTCCATGCAATTACAATGGTGTCTCAATAGCCTTCCACGTCGACTCTAAATCTAACCCATATTATTTTGCTACCGCGGTTGAATATGAAAATGGGGATGGTGATCTTAAAAAAGTTGAACTTATGGAAGCATTTGGCAACACTTGGGTTACAATGCAACAATCATACGGTGCTGTTTGGAAATATAATAAACAGTCACTACTAAGAGCGCCATTTTCTATTAGGCTAACCACAATTGAGTCTGGGAAGATATTTGTAGCAAAGAATGTGATCCCGGCGGGTTGGAAGCCTGGTCAGACTTATAGAGCACTTGGAAATTTTAGTTAA 822 0.4112 MAHTLKCAFSHILILVGSLSILLVTPSSCFSLKKVVNVTSSNYNWSPSVATWYGLPTGDGSEGGACGYGNAVGQPPLSSMISAGSPLIYQSGKGCGSCYEVTCIGNHACSGNPVTVTITDECPGTCGSDSPYHFDLSGRAFGAMAISGQDGNLRKVGKIVVQHRRVPCNYNGVSIAFHVDSKSNPYYFATAVEYENGDGDLKKVELMEAFGNTWVTMQQSYGAVWKYNKQSLLRAPFSIRLTTIESGKIFVAKNVIPAGWKPGQTYRALGNFS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00849 273 SUPERFAMILY PHL pollen allergen 175 267 IPR036749 -
Car03g00849 273 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 63 173 IPR007112 -
Car03g00849 273 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 186 268 IPR007117 -
Car03g00849 273 Gene3D - 170 272 IPR036749 -
Car03g00849 273 SUPERFAMILY Barwin-like endoglucanases 39 172 IPR036908 -
Car03g00849 273 PRINTS Major pollen allergen Lol pI signature 83 94 IPR005795 GO:0005576|GO:0019953
Car03g00849 273 PRINTS Major pollen allergen Lol pI signature 123 138 IPR005795 GO:0005576|GO:0019953
Car03g00849 273 PRINTS Major pollen allergen Lol pI signature 145 160 IPR005795 GO:0005576|GO:0019953
Car03g00849 273 PRINTS Major pollen allergen Lol pI signature 177 192 IPR005795 GO:0005576|GO:0019953
Car03g00849 273 PRINTS Major pollen allergen Lol pI signature 193 208 IPR005795 GO:0005576|GO:0019953
Car03g00849 273 PRINTS Major pollen allergen Lol pI signature 244 261 IPR005795 GO:0005576|GO:0019953
Car03g00849 273 PRINTS Expansin/Lol pI family signature 44 59 IPR007118 GO:0005576
Car03g00849 273 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Car03g00849 273 PRINTS Expansin/Lol pI family signature 85 103 IPR007118 GO:0005576
Car03g00849 273 PRINTS Expansin/Lol pI family signature 156 172 IPR007118 GO:0005576
Car03g00849 273 PRINTS Expansin/Lol pI family signature 214 228 IPR007118 GO:0005576
Car03g00849 273 PRINTS Expansin/Lol pI family signature 254 268 IPR007118 GO:0005576
Car03g00849 273 Pfam Lytic transglycolase 82 151 IPR009009 -
Car03g00849 273 Gene3D - 31 169 IPR036908 -
Car03g00849 273 PANTHER EXPANSIN-B3 19 272 - -
Car03g00849 273 Pfam Expansin C-terminal domain 175 257 IPR007117 -
Car03g00849 273 PANTHER EXPANSIN-B2-RELATED 19 272 - -
Car03g00849 273 SMART dpbb_1 81 163 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00849 Car-Chr3 45226429 45228088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00849 29 272 Expansin Gene Family AT1G65680 56.680 2.60e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00849 - - gmx:548090 388.652